Gene Caci_5804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5804 
Symbol 
ID8337165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6705437 
End bp6707338 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content69% 
IMG OID644958908 
ProductChloride channel core 
Protein accessionYP_003116503 
Protein GI256394939 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACAT CGCCTGTTTC CCCCGCCCCT TCCAAGACCG CCAAGATCTC CACGAGTTCC 
AAGACAGCCA AGAGTTCCAA GGCGGCCAAG AGTTCCAAGG CGGCCAAGCT CAAGCATCCT
GGCCACGCCA TCGCGCACCT CGGCGACTTC CACGTCCCGC CGCGCGTCGT GGTGATCACC
GCGGTCGCCG TGCCGATCGG CGTCTGCGGC GCCCTGGCCG CCTACGCGCT GCTGAAGCTG
ATCACCCTGG TGACGAACAT CTGCTTCTAC GCCCAGTTCA CCCTGCACTC GGCCAGTCCC
GCCGACACCC CGCACCGCTG GCTGATCCCG ATCCTGCCGG TCGTCGGCGG TCTGGTCGTC
GGCCTGATGG CCCGCTACGG CAGCGACAAG ATCCGCGGCC ACGGCATGCC GGAGGCCATC
GAGGCGATCC TGATCGGCGG CAGCAAGGTC CAGCCGCGCG TGGCGGTGCT CAAGCCGCTG
TCGGCCGCGG TCTCGATCGG CACCGGCGGT CCCTTCGGCG CCGAGGGCCC GATCATCATG
ACCGGCGGCG CGATCGGCTC GCTGCTCGCG CAGGTCCTGC ACGTCACGAC CGACGAGCGC
AAGACGCTGC TGGTCGCCGG ATCCGCCGCC GGCATGGCCG CCACCTTCAA CACGCCGCTG
GCCGCGGTCG TGCTCGCGGT GGAGCTGCTG CTGTTCGAGT GGCGTCCCCG TTCCCTGATA
CCCGTGGCGG CGGCAGCCGT CACCGCGACG ATCGTGCGCG GACCGATGCT GGGCTACGGA
CCGCTGTTCG GCGGTGCGCA CGTCCCGGCC CACCTGGCCT TCTACGACTA CCCGCTGTGC
CTGGTGGCCG GCGTGGTCGC CGGACTGCTG GCGATCGGCG CCACGGCGCT GGTGTACTTC
TCCGAGGACT CCTTCGCCAA GCTGCCGATC CACTGGATGT GGTGGCCGGC CATCGGCGGG
GCGATCGTCG GCGTCGGCGG CCTGATCGAG CCGCACGCCC TCGGCGTCGG GTACGACGTC
ATCGACTCGC TGCTCACCGG GCGCGCCACG ACCGGTCTGA TTGTCGGGAT TCTGGTGGTC
AAGACCCTGA TTTGGGGACT GTCGCTGGGG TCCGGGACGT CCGGCGGCGT GCTCGCGCCG
ATGTTCATGG TCGGCGGTGC TCTCGGGGCG GCCGAGGCGA TGATTTTCCC GAGCGTCAGC
CCCGGTTTCT GGGCTTTGGT GTCCTTGGCT GGCGTGCTCG GTGGTGTGAT GCGCTCGCCG
TTGACCGGCA TCGTGTTCTG CTTGGAGCTG ACGCATGAGG TCAACGCGAT ACTGCCGATG
ATCGTCACCG CCGGTACCGC GTATCTGGTC TCGGTGGTGT TCCTGAAGCG TTCGGTGCTG
ACCGAGAAGC TTGCTCGGCG CGGGCTGCAT CTGACGCGCG AGTACTCGGT GGATCCGCTG
GAAGTCCATC TGGTGGGCGG GCTCACCGCG GAGCCGGCGA CGTCGTTCGC GGCTGCGCAG
AGCACAGGTC AGGCCAGTGC GGCGATTCGT GCGTCGCTGC CTGATGGTGA GTTGGCGATT
CAGCGCCTGT ACCCGGTGCT GCATTCCGAC GGCGAGTTGG CGGGCGTGGT CACGCGTGCG
CAGCTGCTGG CGGCTGATGT GGGGGACCTG ACGCCGTTGT CGGAGACGGC GCGGCCCGCG
ATCGCCGCGC AGCCGGCGGA GACGTTGCGG ACCGTGGCCA ACCGGATGGC GCATCATTCG
GTGACGCGGG TCGTGGTGAC CGCCGATCCC CATGAGCCGC CGTATGTTCT GAGCCTGCGG
CAGCTGCTGC ACGCGCGGCG GATCGACCAT CACGAGGAGT CGCAACGCGA GCGGATGCTC
GTGTGGCGGC GTGATCGGGA GGATGTTCAG GTCGGCGGGT GA
 
Protein sequence
MPTSPVSPAP SKTAKISTSS KTAKSSKAAK SSKAAKLKHP GHAIAHLGDF HVPPRVVVIT 
AVAVPIGVCG ALAAYALLKL ITLVTNICFY AQFTLHSASP ADTPHRWLIP ILPVVGGLVV
GLMARYGSDK IRGHGMPEAI EAILIGGSKV QPRVAVLKPL SAAVSIGTGG PFGAEGPIIM
TGGAIGSLLA QVLHVTTDER KTLLVAGSAA GMAATFNTPL AAVVLAVELL LFEWRPRSLI
PVAAAAVTAT IVRGPMLGYG PLFGGAHVPA HLAFYDYPLC LVAGVVAGLL AIGATALVYF
SEDSFAKLPI HWMWWPAIGG AIVGVGGLIE PHALGVGYDV IDSLLTGRAT TGLIVGILVV
KTLIWGLSLG SGTSGGVLAP MFMVGGALGA AEAMIFPSVS PGFWALVSLA GVLGGVMRSP
LTGIVFCLEL THEVNAILPM IVTAGTAYLV SVVFLKRSVL TEKLARRGLH LTREYSVDPL
EVHLVGGLTA EPATSFAAAQ STGQASAAIR ASLPDGELAI QRLYPVLHSD GELAGVVTRA
QLLAADVGDL TPLSETARPA IAAQPAETLR TVANRMAHHS VTRVVVTADP HEPPYVLSLR
QLLHARRIDH HEESQRERML VWRRDREDVQ VGG