Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5804 |
Symbol | |
ID | 8337165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6705437 |
End bp | 6707338 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958908 |
Product | Chloride channel core |
Protein accession | YP_003116503 |
Protein GI | 256394939 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCGACAT CGCCTGTTTC CCCCGCCCCT TCCAAGACCG CCAAGATCTC CACGAGTTCC AAGACAGCCA AGAGTTCCAA GGCGGCCAAG AGTTCCAAGG CGGCCAAGCT CAAGCATCCT GGCCACGCCA TCGCGCACCT CGGCGACTTC CACGTCCCGC CGCGCGTCGT GGTGATCACC GCGGTCGCCG TGCCGATCGG CGTCTGCGGC GCCCTGGCCG CCTACGCGCT GCTGAAGCTG ATCACCCTGG TGACGAACAT CTGCTTCTAC GCCCAGTTCA CCCTGCACTC GGCCAGTCCC GCCGACACCC CGCACCGCTG GCTGATCCCG ATCCTGCCGG TCGTCGGCGG TCTGGTCGTC GGCCTGATGG CCCGCTACGG CAGCGACAAG ATCCGCGGCC ACGGCATGCC GGAGGCCATC GAGGCGATCC TGATCGGCGG CAGCAAGGTC CAGCCGCGCG TGGCGGTGCT CAAGCCGCTG TCGGCCGCGG TCTCGATCGG CACCGGCGGT CCCTTCGGCG CCGAGGGCCC GATCATCATG ACCGGCGGCG CGATCGGCTC GCTGCTCGCG CAGGTCCTGC ACGTCACGAC CGACGAGCGC AAGACGCTGC TGGTCGCCGG ATCCGCCGCC GGCATGGCCG CCACCTTCAA CACGCCGCTG GCCGCGGTCG TGCTCGCGGT GGAGCTGCTG CTGTTCGAGT GGCGTCCCCG TTCCCTGATA CCCGTGGCGG CGGCAGCCGT CACCGCGACG ATCGTGCGCG GACCGATGCT GGGCTACGGA CCGCTGTTCG GCGGTGCGCA CGTCCCGGCC CACCTGGCCT TCTACGACTA CCCGCTGTGC CTGGTGGCCG GCGTGGTCGC CGGACTGCTG GCGATCGGCG CCACGGCGCT GGTGTACTTC TCCGAGGACT CCTTCGCCAA GCTGCCGATC CACTGGATGT GGTGGCCGGC CATCGGCGGG GCGATCGTCG GCGTCGGCGG CCTGATCGAG CCGCACGCCC TCGGCGTCGG GTACGACGTC ATCGACTCGC TGCTCACCGG GCGCGCCACG ACCGGTCTGA TTGTCGGGAT TCTGGTGGTC AAGACCCTGA TTTGGGGACT GTCGCTGGGG TCCGGGACGT CCGGCGGCGT GCTCGCGCCG ATGTTCATGG TCGGCGGTGC TCTCGGGGCG GCCGAGGCGA TGATTTTCCC GAGCGTCAGC CCCGGTTTCT GGGCTTTGGT GTCCTTGGCT GGCGTGCTCG GTGGTGTGAT GCGCTCGCCG TTGACCGGCA TCGTGTTCTG CTTGGAGCTG ACGCATGAGG TCAACGCGAT ACTGCCGATG ATCGTCACCG CCGGTACCGC GTATCTGGTC TCGGTGGTGT TCCTGAAGCG TTCGGTGCTG ACCGAGAAGC TTGCTCGGCG CGGGCTGCAT CTGACGCGCG AGTACTCGGT GGATCCGCTG GAAGTCCATC TGGTGGGCGG GCTCACCGCG GAGCCGGCGA CGTCGTTCGC GGCTGCGCAG AGCACAGGTC AGGCCAGTGC GGCGATTCGT GCGTCGCTGC CTGATGGTGA GTTGGCGATT CAGCGCCTGT ACCCGGTGCT GCATTCCGAC GGCGAGTTGG CGGGCGTGGT CACGCGTGCG CAGCTGCTGG CGGCTGATGT GGGGGACCTG ACGCCGTTGT CGGAGACGGC GCGGCCCGCG ATCGCCGCGC AGCCGGCGGA GACGTTGCGG ACCGTGGCCA ACCGGATGGC GCATCATTCG GTGACGCGGG TCGTGGTGAC CGCCGATCCC CATGAGCCGC CGTATGTTCT GAGCCTGCGG CAGCTGCTGC ACGCGCGGCG GATCGACCAT CACGAGGAGT CGCAACGCGA GCGGATGCTC GTGTGGCGGC GTGATCGGGA GGATGTTCAG GTCGGCGGGT GA
|
Protein sequence | MPTSPVSPAP SKTAKISTSS KTAKSSKAAK SSKAAKLKHP GHAIAHLGDF HVPPRVVVIT AVAVPIGVCG ALAAYALLKL ITLVTNICFY AQFTLHSASP ADTPHRWLIP ILPVVGGLVV GLMARYGSDK IRGHGMPEAI EAILIGGSKV QPRVAVLKPL SAAVSIGTGG PFGAEGPIIM TGGAIGSLLA QVLHVTTDER KTLLVAGSAA GMAATFNTPL AAVVLAVELL LFEWRPRSLI PVAAAAVTAT IVRGPMLGYG PLFGGAHVPA HLAFYDYPLC LVAGVVAGLL AIGATALVYF SEDSFAKLPI HWMWWPAIGG AIVGVGGLIE PHALGVGYDV IDSLLTGRAT TGLIVGILVV KTLIWGLSLG SGTSGGVLAP MFMVGGALGA AEAMIFPSVS PGFWALVSLA GVLGGVMRSP LTGIVFCLEL THEVNAILPM IVTAGTAYLV SVVFLKRSVL TEKLARRGLH LTREYSVDPL EVHLVGGLTA EPATSFAAAQ STGQASAAIR ASLPDGELAI QRLYPVLHSD GELAGVVTRA QLLAADVGDL TPLSETARPA IAAQPAETLR TVANRMAHHS VTRVVVTADP HEPPYVLSLR QLLHARRIDH HEESQRERML VWRRDREDVQ VGG
|
| |