Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5800 |
Symbol | |
ID | 8337161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6702019 |
End bp | 6702987 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958904 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003116499 |
Protein GI | 256394935 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.33827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAATC CACCAATGGC CACCCCGAGC GTCGAGACGA CCGAGCACAG CACGTCCGGT GCCGGTGCCC GTGCCGGTTC CGGCCCGACC GCGATGGCCA GCCGGGCGCT CGGCGCGATC CCGCCGACGA TGCTGGTGCT GCTGGACATC CTCAGCGCTC AGCTGGGTTC GGCGCTCGCC AAGCACCTGT TCGGCGCCGT CGGCAGCTTC GGGGCGGTGG CGCTGCGGCT GTTCTTCGCC TCGACGGTTT TGTTGCTCTT CTGGCGTCCG TCGCTGCGCC TGGAGCGCCG GACCTGGATG GTGGTGCTCG GCTACGGCAT CGTCCTGGGC TCGATGAACC TGTGCTTCTA CCAGTCGCTG GCACGCATCC CACTGGGCGT CGCGGTGACC ACCGAGTTCC TGGGACCGCT GGCGGTGGCC GCGGCCGGGT CGCGGCGGTG GCTAGACGCG CTGTGGGCGC TGCTCGCCGG GGGCGGAGTG CTGCTGCTGA CGGAAGGGGG CGGCGCGCTG GACCTCGTCG GCGTTCTGTT CGCCCTCGCG GCGGGCACGT TCTGGGGTCT CTACATCCTC ATGGGCGCCG CCCTCGGACG CCACACCACC GAAGGCGACG GTCTGGCGCT GGGCATGGCC GTCGCGGCGC TGATGACCGT GCCGTTCGGC GTCGCCGAGA GCGGCACGGC GGTGCTGCGG CCGTGGGTGC TGCTGTTGGG ACTCGGCGTT GCGCTGTTGT CCTCGGTGCT GCCCTACACA CTGGATCTGG AGGCGCTGCG CAAGATGCCG CCGCGTGTGT TCGGGATTCT GATGAGCCTG GAGCCGGCGG TGGCGGCGCT CATCGGGCTG GTCGTGCTCG GGGAGTCGCT GGGGTGGTCG CAGTGGCTCG CGATTCTGTT CGTGGTCGCG GCGTCGGTCG GGGCGACCCG TGGCACGCAG TCGAGCGAAG TAACTACGAG CCCTGAAATG GTCGGCTAG
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Protein sequence | MHNPPMATPS VETTEHSTSG AGARAGSGPT AMASRALGAI PPTMLVLLDI LSAQLGSALA KHLFGAVGSF GAVALRLFFA STVLLLFWRP SLRLERRTWM VVLGYGIVLG SMNLCFYQSL ARIPLGVAVT TEFLGPLAVA AAGSRRWLDA LWALLAGGGV LLLTEGGGAL DLVGVLFALA AGTFWGLYIL MGAALGRHTT EGDGLALGMA VAALMTVPFG VAESGTAVLR PWVLLLGLGV ALLSSVLPYT LDLEALRKMP PRVFGILMSL EPAVAALIGL VVLGESLGWS QWLAILFVVA ASVGATRGTQ SSEVTTSPEM VG
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