Gene Caci_5790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5790 
Symbol 
ID8337151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6691164 
End bp6691550 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content70% 
IMG OID644958894 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003116489 
Protein GI256394925 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.120681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGTA GTGGGTACAG TCTAATAGCC GTGACCACCA GCCATGACCC TCAGCTCCTC 
AAGGGCGTGC TGTCGATGGT GCTGCTCCAT CTGCTGGCCG AGAAAGAGTC CTACGGCTAC
GAGGTGGCGC AACGCCTGCA GGCGGCGGGC TTCGCAGACG TGCTCGAGGG CACGGTCTAC
CCCGCCCTCA CCCGCCTCGA GCGAGAGGGG CGCCTGGCCA CCCGGCTGGT GCCCTCACCG
AACGGCCCGG CGCGCAAGTA CTACCGGCTC ACCCCGACCG GACGCGAGAC CCTGCACGCC
GCCGGGCAAA GCTGGTCGCG GCACGTGAGC GCCGTCGAGG CCGTGCTCGC CCGTCCGCTT
CCGCCGCCCC CGGAGGAAGG CTCCTGA
 
Protein sequence
MSSSGYSLIA VTTSHDPQLL KGVLSMVLLH LLAEKESYGY EVAQRLQAAG FADVLEGTVY 
PALTRLEREG RLATRLVPSP NGPARKYYRL TPTGRETLHA AGQSWSRHVS AVEAVLARPL
PPPPEEGS