Gene Caci_5787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5787 
Symbol 
ID8337148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6688109 
End bp6689044 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID644958891 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_003116486 
Protein GI256394922 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.356272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCCG GTGTGCTGTC CTACGCGGCG CTGGCGGCGG TCAACGGGCA TCGAGACCCG 
GAGCCGGCTT CCTTCGGCGC GCCTCCCTCG CTCCCCGGGC TGCCGCCGCT CGCACCGCTG
CCGCCGTCCT CCTCAGCGTC GTCGGATCCG CATGCTGCCA CTCCCAGCAC GGTGTGGCCG
GCGCACGGAC AAGCCGCCTT CATCGAGACC GGACAGTCCC GGGTCCAAGC CGGACCGAAC
CAGCACGCCG CGCCGATCGC CAGCGTCACC AAGGTGATGA CCGCCTATCT CGTGCTCCGC
GACCATCCGC TGCGGGCCGG CCAAGACGGT CCGGCTCTCA CCCTCACCGA CGCCGACGTC
GCCGACACCG CTCAGCGGCG CTCGCAGGAC CAGTCGATCG TTCCCGTCGC TGCCGGCGAG
CATCTGACGG AGAGGCAAGC GTTGCAGGCC CTGTTGCTCC CTTCGGCGAA CAACATCGCG
GTGGTCCTGG CCAGGTGGGA CGCGGGTTCG GTGGACCAGT TCGTCGCGCG GATGAACGCC
ACCGCGCAGT CGCTGGGCAT GCGCGACACC CGCTACACCG ATCCGAGCGG CTTCGACGAG
GCGACGGTGT CGACCGCGGT CGATCAGGTA CAGATCGTCG CCCGCGCGAT GAGGCTGCCG
GTGTTCGCGG ACATCGTGGC GATGCCGAGC GCGGCACTGC CGGTCGCGGG CACGGTCGCC
AACACCGACA CGCTGGTGGG CCACGACGGG TTCGTCGGCG TCAAGACCGG CTCGGACGAC
GCGGCCGGCG GCTGCTTCGC CTTCCAGGCG GTCCGCACGA TCGGCGGGAA GCAGACCACG
ATCACCGGCG TCGTGCTGGG CCAGCCCGGC GCGAACCAGA TCGCCGCCGG TCTCATGGCG
GCGAAGGCGT TGGTCGACCG GATCGCGGGT CAGTAG
 
Protein sequence
MLAGVLSYAA LAAVNGHRDP EPASFGAPPS LPGLPPLAPL PPSSSASSDP HAATPSTVWP 
AHGQAAFIET GQSRVQAGPN QHAAPIASVT KVMTAYLVLR DHPLRAGQDG PALTLTDADV
ADTAQRRSQD QSIVPVAAGE HLTERQALQA LLLPSANNIA VVLARWDAGS VDQFVARMNA
TAQSLGMRDT RYTDPSGFDE ATVSTAVDQV QIVARAMRLP VFADIVAMPS AALPVAGTVA
NTDTLVGHDG FVGVKTGSDD AAGGCFAFQA VRTIGGKQTT ITGVVLGQPG ANQIAAGLMA
AKALVDRIAG Q