| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5777 |
|---|
| Symbol | |
|---|
| ID | 8337138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6675779 |
|---|
| End bp | 6677125 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958881 |
|---|
| Product | import inner membrane translocase subunit Tim44 |
|---|
| Protein accession | YP_003116476 |
|---|
| Protein GI | 256394912 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTATCG GGCGGCGGAT ACTCGTGCTC GCGGCGGTCG TGGCGCTGAG CAGTCCAGCG
GTGGCACAGG CGCGCGGCGG GGGCGGCGGC CACGGGTTCG GCGGGGGCGG TGGCGGCGGC
GGACACGGCG GTGGCGGTGG CGGCTTCCAC GGCGGCGGGG TCGGCTTCGT CGGCGGCGGG
GGATCCGTCG GCGTGCTGCT GATCGTCGCG GTGATCGTCC TGATCGTGTG GTTCGCGTTC
AAGGCTCGCA GCGGGAACGG CGTCGGCTCC AAGCGCGGCC TGAACACCGG GTCGGACCGG
ACGGCGCACC GCTCGGACGC GGCGGCGGCG CAGCGTGCCA CGCAGATCGA GGCGCGGGTC
GCGGCGGTCG CCGACAACGA CCCGACTTAT GCTCCCGAGG CGCTGAAGGC GCGCGCCGTC
TGGCTGTACA CGACCGCGCA GCGTGCCTGG TCCGACCGCG ACCGCGCCGT GCTGAAGCAG
ATCCTGTCCC CGGTGCTCTA CGTCAAGTGG GACGAGGAGC TGCGGGACTA CCAGTCGCGC
GGCGAGATCA ACACGGTCGA CATCGTCTCC GGGCCGAGCG TCCAGATGGT CAACATCGCC
AACCGCGCCG GCGAGGTGAA CGACACCATC ACCTTCCGGA TCACCGCGAC GCTGAACGAC
CGCGTGGTCC GTGCCAACGG TTCCCACGCC GTCCGCAAGG ACGGCTCGAC GCGTCCCGTC
GAGTACTGGA CGCTGCGCAA GGACGCCTCC GGCGAGTGGA TGGTGGCCTC GATCGAGCAG
GCGGCCGAGG GCGCGCACCA CCTCACCGAC GCCATCGAGA CCGACGTCTG GGACCAGAAG
GCCGTCGCGC GCGACGCCGT GCTCGAAGTC GCCGAGAACG TCTCGGTCAA GGGCGCCGGC
GACATCCTGG CGCTGACCGG CATCTCCTGG AGCACCGACG CCGACGCCGC CGCCGGGGAC
CTGAGCGTCC TGGACGGACG GTTCGACAAG GCGGTCCTGG AGGTCGCCGT CGAGCAGTTC
CTCGAAGAGT GGGCGATGAA CGACGGCAGC CTGGACTTCA CCTCCGTGCG CACCGCCAAC
CGCACCGTGA TGCGCAACGC CGCCGTCTCG GCGGTCGAGG TGCGCTCGCT GGTCTCGCGG
GAGCCGATCG TGGTCCGCGT CGTGGTCGAG GCCGAGGGCT TCTATTACGA GGTCGACCGC
CGCACCGAAG AGGTGCTGCT CGGCGACGCG CACAAGCGGC GCCCGGTCGT CTTCTCCTTC
GACCTGCGCC TGGACGGCCC GACGGCGCGG GGGTGGACGG TGGTCGCCGC CGAGACGTCG
CTGCCGGGGT CGCGGATCGC GCGCTGA
|
|---|
| Protein sequence | MRIGRRILVL AAVVALSSPA VAQARGGGGG HGFGGGGGGG GHGGGGGGFH GGGVGFVGGG
GSVGVLLIVA VIVLIVWFAF KARSGNGVGS KRGLNTGSDR TAHRSDAAAA QRATQIEARV
AAVADNDPTY APEALKARAV WLYTTAQRAW SDRDRAVLKQ ILSPVLYVKW DEELRDYQSR
GEINTVDIVS GPSVQMVNIA NRAGEVNDTI TFRITATLND RVVRANGSHA VRKDGSTRPV
EYWTLRKDAS GEWMVASIEQ AAEGAHHLTD AIETDVWDQK AVARDAVLEV AENVSVKGAG
DILALTGISW STDADAAAGD LSVLDGRFDK AVLEVAVEQF LEEWAMNDGS LDFTSVRTAN
RTVMRNAAVS AVEVRSLVSR EPIVVRVVVE AEGFYYEVDR RTEEVLLGDA HKRRPVVFSF
DLRLDGPTAR GWTVVAAETS LPGSRIAR
|
|---|
| |