| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5770 |
|---|
| Symbol | |
|---|
| ID | 8337131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6669456 |
|---|
| End bp | 6670061 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644958874 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003116469 |
|---|
| Protein GI | 256394905 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.805337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGA CCGTCCGAGC ACCGCGCGAC CGGGACGAGC CGGGCCGGCG CAGCCGCGAG
CAGCTGCGCG ACGCCGTGCT CACCGCCGCC GGCGAGCTGA TGCTCGAGGG CGGACTGGCC
GCCGCGACCA TGGAGGCCAT CGCCGCGCGC GCGGCGGTGA GCAAGCGGAC GCTCTACAAG
TACTGGCCCT CGCGCGGCGC CGTCGCGCTG GAGGGCTTCA TGCGCAACGC CGCCTCCTCC
TGGTCCCTGC CGGACGACGC CTCGGCGACC GAGCAGCTCA CCGCCCTGGT CGTCAGCGCC
GCCCGGCTGT TCGACGGCAC CCCCGCCGGA CCGCTGATGC GCTCGCTGAT CGCCGACGCG
CAGTCCCAGG ACGAGATCGC CACAGCCATC CGCGAGCAGT GGCTGCGCCC GCGCCGCGCC
GTCGCCGCCG ACCTGATCCG CCGCGGTGTG GCCGAGGGCG AATTCCGCCC CGACATCGAC
GTCGAGATCA CCCTGGACCT GCTGTTCGCG CCGGTCTACT ACCGGCTGCT GCTCGGCCAC
GAGCCGATGG ACGAGGACTT CGCCACCGCG ACGGTCGAGC ACGCGGTCAT CGGACTGCGG
CGCTAG
|
|---|
| Protein sequence | MEQTVRAPRD RDEPGRRSRE QLRDAVLTAA GELMLEGGLA AATMEAIAAR AAVSKRTLYK
YWPSRGAVAL EGFMRNAASS WSLPDDASAT EQLTALVVSA ARLFDGTPAG PLMRSLIADA
QSQDEIATAI REQWLRPRRA VAADLIRRGV AEGEFRPDID VEITLDLLFA PVYYRLLLGH
EPMDEDFATA TVEHAVIGLR R
|
|---|
| |