| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5761 |
|---|
| Symbol | |
|---|
| ID | 8337122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6659007 |
|---|
| End bp | 6660098 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958865 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003116460 |
|---|
| Protein GI | 256394896 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.230872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.079116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG CCGATTCCGA CGGCGCTGTC CTGATGCCGC GCATCGATCA GACCGGAGCC
GCTGTGGGCG ACAGCAGCCT CACCGACGTC GCCGTGCGCG CGGGGGTCTC GACGGCGACG
GTCTCGCGGG CGCTGCGCGG GCTGCCGTCG GTGACCGAGG AGACGCGGGC GCGGATCAAG
GCGGTCGCCG ACGAACTGGG CTATGTGGTC TCCCCCAGCG CGTCGCGGCT GGCCACCGGG
CGCACGCACA CCGTCGGCGT CATCGTGCCC TCCATCGACC GCTGGTTCTC CGGCCAGGTC
ATCAAAGGAG TCGAGCAGGT CCTCCGCGCC GCCGGCTACG ACCTCCTGTT CTACAACCTC
GGCGACGACG AAGGCCGCGC CCGCTTCTTC GAGGCGATGC CCCTGCGCCG CCGCGTGGAC
GCGGTCCTGG TACTTTCCGT GCCCCTGCAG GACCCCGAAG TCGCCAAACT GCGCTCCCTG
CACCTGCCGA TCGGCCTGGT GGGCGCCTCA GCCGACACCT TCTCCAGCGT CCGCATAGAC
GACCTCGCCG GCGCCGCCAC CGCCGTCCGC CACCTGATCG GCCTCGGCCA CCGCGACATC
GCCCTGATCT CCGGCGGCAC CGACGTCCCC CCGCACTTCA CCACCCCCAC CGACCGCCGC
CGCGGCTACC TGGACGCCCT GGCCGCATCA GGCATCGGCT ACGACCCCGC CCTCGAAGCC
GCCGGCGATT TCACCATCAC CGGCGGCGAA CGCGCCATGA GCCACCTCCT GGGCCGCCCC
CACCACCCCA CCGCCGTCTT CGCCCTCTGC GATGAAATGG CCTTCGGCGC CATGCGCGTC
CTGCGCACAT CAGGCCTCCG CATCCCCCGC GACATCTCCG TCATCGGCTT CGACGACCAC
GAAATGTCCG ACCTCCTCGA CCTGACCACC ATCAGGCAGC CGGTGGTGGA ACAGGGCGCG
ACAATCGCCC GCCTCCTCCT GGACCGCCTA TCAGCAGAGG CACACACCCG CCCGCACCAG
AACGAGGTCT CGCTGCCGAC ACAGTTGGTA GTGCGCGGCA GCACGGCGCC GAGGCGCGCC
CGACGCGCCT GA
|
|---|
| Protein sequence | MSTADSDGAV LMPRIDQTGA AVGDSSLTDV AVRAGVSTAT VSRALRGLPS VTEETRARIK
AVADELGYVV SPSASRLATG RTHTVGVIVP SIDRWFSGQV IKGVEQVLRA AGYDLLFYNL
GDDEGRARFF EAMPLRRRVD AVLVLSVPLQ DPEVAKLRSL HLPIGLVGAS ADTFSSVRID
DLAGAATAVR HLIGLGHRDI ALISGGTDVP PHFTTPTDRR RGYLDALAAS GIGYDPALEA
AGDFTITGGE RAMSHLLGRP HHPTAVFALC DEMAFGAMRV LRTSGLRIPR DISVIGFDDH
EMSDLLDLTT IRQPVVEQGA TIARLLLDRL SAEAHTRPHQ NEVSLPTQLV VRGSTAPRRA
RRA
|
|---|
| |