| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5758 |
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| Symbol | |
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| ID | 8337119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6655507 |
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| End bp | 6657003 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958862 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003116457 |
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| Protein GI | 256394893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.576382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.192043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTGTT ACCAGCGCAA TATCTATGAA GCACTGGACA ATCTCCGATG CAAGCGCTTG
CATTGCCGTC ACTGCGTCGC GGTTCACCAG CACGCGTACG ACACCGGCGA CATGGAAGGC
GACCACGTGT TTCGATCAGC TTGCCTGCTC GCGGCGGCGG TCGCCGCCAC CACCCTCATG
ACCGCGTGCT CGAACGGATC CGGCGGGCCC GGCGGTTCCG ACGACTCCGG CCAGACCGGG
GCGGCGGCTG CGACGCTGAC CGGCGACTGC GCGCAGTACC AGGCGTACGC CGGGCACGCG
GGCAAGAAGG TGACGATGTT CGCCTCGATC ATCTCGCCGG AGTCGGACTC GCTGCAGCAG
TCCTGGAAGC AGTTCGAGGA CTGCACGGGG ATCACGATCC AGTACGAGGG ATCGAACGAC
TTCGAGTCGC AGCTGCCGGT GCGGGTCAGC GGCGGCAACG CCCCCGACCT CGCGGTGATC
CCCCAGCCGG GGCTGCTGGC GCAGATGGTG GCGAGCGGGC AGGTGGCCAA GCCCTCGGCG
GGGACGCAGG CGAACGTCGA CAAGTACTGG AACAAGTCCT GGAAGACCTA CGGGACCGTC
GACGGGACGT TCTACGCCGC ACCGATGTCG GCGAACATGA AGTCGCTCGT CTGGTATTCG
CCCAAGGCGT TCGCCGCGGC CGGCTACCAA ATACCGACCA CCTGGGAGGC GATGGTGGCG
CTGTCGAACC AGGTCGCGGC GTCGGGCAAG AAGCCGTGGT GCGCCGGGAT CGGGTCGGGG
ACGGCGACGG GCTGGCCGGC CACCGACTGG CTGGAGGAGG TCGTGCTGCG CAAGTACGGC
GGCGCCGTGT ACGACCAGTG GGTCAGCCAC CAGATCACGT TCAGCGATCC GCGCATCGAG
GACGCGATGA ACACCGTCGC CGGGTGGATG CAGAACCCCG CCTGGGTCAA CGGCGGATAC
GGGGACGCCA AGACGATCGC GTCCACGTCG TTCCAGGACG CCGGCAAGCC GATCCTCACC
GGGCAGTGCC TGATGATGCA GCAGGCATCG TTTTACGAGC CGCAGTGGCC GAAGGGGACG
AAGGTCGGCC CGGACGGCGA CGTCTTCGCC TTCTACCTGC CGGGCATCTC CGCCTCGGTC
CCGACTCCGG TGGAGGGCGG CGGGGAGTTC GTGACCGCGT TCTCCAGCCG GCCGGAGGTG
CGGGCCGTCC AGGAGTACCT GTCGACGCCG GGCTGGGCGA CCAGCCGGAT CAAGGTGGCG
CCGGGCTGGG TGTCGGCGAA CACCGGGGTC GACCCCGCGG TCTACACCGA TCCGATCGAC
GCCTTGTCGG CCAAATACCT GACCGATCCG AAGGCCACGT TCCGGTTCGA CGCCTCGGAC
ATGATGCCGG CCGCGGCCGG CTCGGGGGCG GAGTGGACCG CGATGACCGC GTGGTTCGGC
GAGGGCAAGT CGGTGGCGCA GACCGCCAAG GCGATCGATG ACGCCTGGCC GCGGTGA
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| Protein sequence | MNCYQRNIYE ALDNLRCKRL HCRHCVAVHQ HAYDTGDMEG DHVFRSACLL AAAVAATTLM
TACSNGSGGP GGSDDSGQTG AAAATLTGDC AQYQAYAGHA GKKVTMFASI ISPESDSLQQ
SWKQFEDCTG ITIQYEGSND FESQLPVRVS GGNAPDLAVI PQPGLLAQMV ASGQVAKPSA
GTQANVDKYW NKSWKTYGTV DGTFYAAPMS ANMKSLVWYS PKAFAAAGYQ IPTTWEAMVA
LSNQVAASGK KPWCAGIGSG TATGWPATDW LEEVVLRKYG GAVYDQWVSH QITFSDPRIE
DAMNTVAGWM QNPAWVNGGY GDAKTIASTS FQDAGKPILT GQCLMMQQAS FYEPQWPKGT
KVGPDGDVFA FYLPGISASV PTPVEGGGEF VTAFSSRPEV RAVQEYLSTP GWATSRIKVA
PGWVSANTGV DPAVYTDPID ALSAKYLTDP KATFRFDASD MMPAAAGSGA EWTAMTAWFG
EGKSVAQTAK AIDDAWPR
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