| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5755 |
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| Symbol | |
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| ID | 8337116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6652338 |
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| End bp | 6653480 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958859 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003116454 |
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| Protein GI | 256394890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.11537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACT CACCGAACCG CGCACTCATA AGCCGGAGCA GCCGCAGCAC CCGGAGCCGG
ACGCGGCGCA CTCGGGCCGG CGCGGCTGTC CTGGCCGTGT GCGTCACCGC CTCGCTCGCC
GCGTGCAGTT CGTCGAAGTC GGCCGCCGGC GGGTCCGCCG CGGGCACCGG GTCGTCGGTC
GGGGTGTCGT TGATCCTCAA GACCCTCACC AACCCGTACT TCGTCAGCAT GGAGAACGAC
GCCAAGACCG CTGCGGCGAA GGACAACGTG CACCTCACGG TCGCCGCCGG CACCAAGGAC
GGCGACACCC AGACCCAGAT CAGCGCCATC GACACCGCGA TCTCCCGCGG CGACAAGGGC
ATCCTGATCA CCACGAACGG CGACGCGGTC AACGCGGCGC TGAACCAGGC CAAGGCCGCC
GGGCTGTTCG TGATCGCGCT GGACACGGCG CCGAACCCGC CGAGCGTCGC CGACATCACC
TACGCCACCG ACAACGAGCA GGCCGGCAAG CTCGACGGCC AGTACGCCGC GGCGGCCCTG
GCTGGCAAGC CGGCGGTCAT CGCCATGCTC GACCTGTTCA ACAACCAGGT CGTCTCCGTG
GACATCCAGC GCGACCACGG CTTCCTGGAA GGCATGGGCA TCACCCCGGG AAGCACCACG
CAGAACGGGC AGGAGGCGAA GTCGGGCTCT TACTCCGGCG GCACGTACAC CATCGCCTGC
CACCAGCCCA CGCAAGGCGC GATCGACGGC GGGCGCACCG CGATGGAGAA CTGCCTGTCC
GCCAACCCGA ACATCAACGT CGTCTACGCG ATCAACGAAC CGGCCGGTGA GGGTGCGTAC
AACGCGCTGA AGGCCGCGGG CAAGACCGGC CAGGTCAAGA TCTTCGCCAT CGACGGCAGC
TGCTCCGGTC TGAAGCTGGT CACCAGCGGC GAGTTCGCCT CCGACGCCGT GCAGTACCCC
GGCAAGATGG CCGGCTTGGG CGTCGACTCG ATCGCCAAGC TGGCCCGCGG CGGCGCCAAG
CCGACCGTCA CCGCCGGCAA GACGTTCTTC GACACCGGCA CCGCCCTGGT CGCCACCGCC
GCGCAGACCG GCGTCACCGT CCAGTCGCCG ACCGACGCCG CGGCGGCGTG CTGGGGCAGC
TGA
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| Protein sequence | MNNSPNRALI SRSSRSTRSR TRRTRAGAAV LAVCVTASLA ACSSSKSAAG GSAAGTGSSV
GVSLILKTLT NPYFVSMEND AKTAAAKDNV HLTVAAGTKD GDTQTQISAI DTAISRGDKG
ILITTNGDAV NAALNQAKAA GLFVIALDTA PNPPSVADIT YATDNEQAGK LDGQYAAAAL
AGKPAVIAML DLFNNQVVSV DIQRDHGFLE GMGITPGSTT QNGQEAKSGS YSGGTYTIAC
HQPTQGAIDG GRTAMENCLS ANPNINVVYA INEPAGEGAY NALKAAGKTG QVKIFAIDGS
CSGLKLVTSG EFASDAVQYP GKMAGLGVDS IAKLARGGAK PTVTAGKTFF DTGTALVATA
AQTGVTVQSP TDAAAACWGS
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