Gene Caci_5752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5752 
Symbol 
ID8337113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6648324 
End bp6649862 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content70% 
IMG OID644958856 
Productlipase class 3 
Protein accessionYP_003116451 
Protein GI256394887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0300845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.133238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA CCCAGATCAC CGCGTCCACG GCCATGACCC TCGCCGCGAT CGCGCCCACC 
GGGGCGACGT CGCGGCCGTC GGGGGAGAGT CCCCAGGTGC AGACCGCGCG CGTGCGGACC
GGGGTCGCGC GGCAGTTGGC GGACTGCACC AGCTGGGAGC TGAAGTGGCT GGGACTGAGC
CCTGACAACG CGAACATGGC CTACATCGCG GTGAACCTCG AGCCGGACTC CGGTCAGGTC
GCCGTGGTGA TCCGCGGGAC CGACGCCAAC GCCCTGGACA TCATGGAGGA CCTCACGGTC
GGCACGGTCG TCCCGTTCAC GGCCGGCGGG TCGCCGACCC CGGTCTCGGT GTCGAAGGGC
GCGATGGCGG CGTTCACGCA GGTCGTGAAC ATGCTGCCGG CCGTGCCGGA CCCGGCTGCC
GACGGCGGCA TCCTCCTGCA AGGCCTCGCC GATGTCTTGG CCACCATGGC GCCGGACCCG
ACGGTCTACG TCATCGGGCA CAGCCTCGGC GGCTGCGTCG CGACCATGGT CGCGCTGTAC
CTGAAGGCGC AGCGCTGGAC GAACCCGCCG AACATCGGGG TCCTCACCTT TGCCGCGCCC
ACCGCCGGTC TGGCCGACTT CGCCGCCTAC TTCGGCGCCC AGAACTGGGC CCAGTGCGAG
CGCCACGTCA ACCGCTACGA CCTGATCCCG CAGGCGTGGG CCAGCCTCGA CATCCCCATC
GACCCGCTGC GCCCCTGGTA CCCCGACCCC GGGCCGAAGG GGACCGAGGA GGTGGAGGTG
CTGATCAGGG CCGTGAAGGG CTTTCCCGGC TACAACACCT ACGTCCAGCC CTCGCCGATC
ACGGAGTGGA ACCACGACTA TCAGACTGTT GATAGAGGGC TGATCAAGCA CAGTACCGAG
GACTTCATGG GCCAGGTCGG CTATCAGCAT GCGAACACGA CCTACCTGAG CCTGCTGGGC
GCGACCGTGC CGCTGACCCC GACGCCGGTC GTGACCAGCG TGTCTCCCAC CTTCGGCGCC
GCGCAGTCGC AGGTGACGAT CACCGGCAGC GGCTTCTCCG CCTTTACCGA GGACGACACC
GCCGTCGACT TCGGTCCCAT CGCCTGCGGC GGCAACGCGT TCGAGATCAA GAGCGACAAC
CAGATCGTCG TGCACAACGT GCCCTGGGGC TTCGGCATCG TCGACGTGTG CGTCACCAAC
CCGCTCGGCA CCTCCCCGGC CGTGCCGCTG GCCCAATTCG CCTACGGCGG CCCGGAACCG
GTCGTGGTCA CCGCCATCGC CCCGACCTCG GCCGCCACCG GCCAGCAGGT CACCGTCACC
GGCACCGGCT TCGGCGCCCA CGCCATGGTC TACTTCGGTG AGAAGCCCTC ACCTCTGGTC
ACCCTCGGCA GCGACGACCC GCCGCAACTC GTCGCGACCA TCCCCGACTC CGGCAAGCGG
CCGGGCAAGG TCGTCGGCAC CGTCGTGGGC GTCACCGTGG CCGTGAACGG ATACTCCTCC
CCGACCACAC CGCTGGACGA GTTCACCTAC ACCGGCTGA
 
Protein sequence
MAATQITAST AMTLAAIAPT GATSRPSGES PQVQTARVRT GVARQLADCT SWELKWLGLS 
PDNANMAYIA VNLEPDSGQV AVVIRGTDAN ALDIMEDLTV GTVVPFTAGG SPTPVSVSKG
AMAAFTQVVN MLPAVPDPAA DGGILLQGLA DVLATMAPDP TVYVIGHSLG GCVATMVALY
LKAQRWTNPP NIGVLTFAAP TAGLADFAAY FGAQNWAQCE RHVNRYDLIP QAWASLDIPI
DPLRPWYPDP GPKGTEEVEV LIRAVKGFPG YNTYVQPSPI TEWNHDYQTV DRGLIKHSTE
DFMGQVGYQH ANTTYLSLLG ATVPLTPTPV VTSVSPTFGA AQSQVTITGS GFSAFTEDDT
AVDFGPIACG GNAFEIKSDN QIVVHNVPWG FGIVDVCVTN PLGTSPAVPL AQFAYGGPEP
VVVTAIAPTS AATGQQVTVT GTGFGAHAMV YFGEKPSPLV TLGSDDPPQL VATIPDSGKR
PGKVVGTVVG VTVAVNGYSS PTTPLDEFTY TG