Gene Caci_5750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5750 
Symbol 
ID8337111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6646214 
End bp6647053 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID644958854 
Productprotein of unknown function DUF574 
Protein accessionYP_003116449 
Protein GI256394885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.294464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.234327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGC AGCCGTTGCA GGGAGAAGAG CCGACAGCAG ACTCGAGCAG CCTGCCGCCG 
TCCGTCGACA TCTCGGTCGC CCACCCGGCG CGCATGTACG ACTATTACCT CGGTGGCAAA
GACAACTACC CAGCCGACCG CGCAGCCGCC GAGAACGTCC TGGCCGTCCT GCCCGAGGGA
CGCGACATGG CGATCGCCAA CCGGGCGTTC CTCGGTCGGG CGGTACGCCA CCTGGCCGAC
GCCGGCATCG ATCAGTTCCT GGACATAGGC ACGGGCATCC CGGGCCCGGG AAACACCGGC
CAGGTCGCCG ACGCCGTACG CCCCGGATCC CGCGTCGTCT ACGTGGACAA CGACCCGATC
GTGCTTGCAC ACTCCAGAGC CCTGCTGGCC CGTCACGACC CCGACCGCAC CGCCGTCGTC
CAAGCCGACC TCCGCAGCCC GGCAGCGATC CTGAACCACC ACGACGTACG CACGGTCCTG
GACTTCACCA AGCCCATCGC ACTCCTGCTG GTCGCGGTCC TCCACTTCAT CAAAGAGGAA
GAAGACCCCG CCGCCATCGT CGCCGAACTC CTGGCAGCCC TAGCCCCCGG CAGCTACCTG
GTCATCTCCC ACGGCACCGA CGAATTCGAC ACCTCCCGAG CCCGAGCCGC GGTCCGCAAC
TACGACAAGG CCACCGCCCC CTTCGTCCTG CGCAGCCACA ACCAGATCCA CGCATTCTTC
GACACCCTGA AGCTGGACGC CCCCGGCCTG GTGCAACTCC CCTGGTGGCG CCCCGACGGC
GAGATCCCGC CGGGGTCCGA GGCGATCTGG CTGTATGGAG GGGTTGGACG CAAGGCTTAA
 
Protein sequence
MPKQPLQGEE PTADSSSLPP SVDISVAHPA RMYDYYLGGK DNYPADRAAA ENVLAVLPEG 
RDMAIANRAF LGRAVRHLAD AGIDQFLDIG TGIPGPGNTG QVADAVRPGS RVVYVDNDPI
VLAHSRALLA RHDPDRTAVV QADLRSPAAI LNHHDVRTVL DFTKPIALLL VAVLHFIKEE
EDPAAIVAEL LAALAPGSYL VISHGTDEFD TSRARAAVRN YDKATAPFVL RSHNQIHAFF
DTLKLDAPGL VQLPWWRPDG EIPPGSEAIW LYGGVGRKA