Gene Caci_5742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5742 
Symbol 
ID8337103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6623713 
End bp6624636 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID644958846 
ProductTaurine dioxygenase 
Protein accessionYP_003116441 
Protein GI256394877 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.448505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCT ACGCCACCCT GCAAGCCCTC CTCACCGGTC GTGATCTCGC CGCCGGCCCT 
CGCAGGGGTC TGCGACGCCT GCCGGAGGGC GAGGAATCCC GGCCCTACGA GACCGTCACG
GTCACCCCGT GCACCCGGCT GATCGGTGCG CAGATCTCGG GAATCGATCT CGGCGAGCCG
GTCGCCCCCG AGGTATTCGC CGAACTGGAT CGCGCGCTGC TGGAATTCAA GGTCCTGTTT
TTCCGGGGTC AAAGTCGGGT CACCGCTGCC CGGCATCGGG ATTTCGCAGG AATGTGGGGC
GAATTGGAGA TCCATCCCTT CCTGCCACAG GGCGACGTGG CGGAGATCGT GCGTTTCGAG
AAGAGCGAGA GAGAAGCCGG CGTGGAGAAC GTCTGGCACG CCGACGTCAC CTGGCGCGAG
AAGCCCGCGC TCGGCTCGGT GCTGCGCGCC GTGGAGGTGC CCGAAGCCGG CGGCGACACC
TGCTTCGCGG ACATGGCCGC CGCCTACGAC TGCCTGCCCG AGCAGGTCAA GGCCCGCATC
GAGGGGCGGG TGGCCGTGCA CGACTTCACC CTGCCGTTCG GCATCGGCAT GGACCCGGAC
AAGCTGAAGG AGATGCAGGA GAAGTACCCG GCGGTGGAAC ACCCGGTGGT ACGGACCCAT
CCTCGGACCG GGCGGCGCAC GCTGTTCGTG AACGCGATCT TCACCACGCA CATCGTCGGG
CTGCCGGAGC AGGAGAGCGA GGAACTGCTG AAAGTCTTGT TCCGGCAGGC TTCGGTGCCG
GAGTACCAGG TCCGGTTCAA GTGGGAGCCC GGGTCGATCG CGTTCTGGGA CAACCGGGCC
GTGCAGCACT ACGCGGTCAG TGATTACTTC CCGCGGCGCC GGGTGATGGA GCGTGCTGCG
ATCCTGGGGG ACCGGCCTCG GTAG
 
Protein sequence
MAPYATLQAL LTGRDLAAGP RRGLRRLPEG EESRPYETVT VTPCTRLIGA QISGIDLGEP 
VAPEVFAELD RALLEFKVLF FRGQSRVTAA RHRDFAGMWG ELEIHPFLPQ GDVAEIVRFE
KSEREAGVEN VWHADVTWRE KPALGSVLRA VEVPEAGGDT CFADMAAAYD CLPEQVKARI
EGRVAVHDFT LPFGIGMDPD KLKEMQEKYP AVEHPVVRTH PRTGRRTLFV NAIFTTHIVG
LPEQESEELL KVLFRQASVP EYQVRFKWEP GSIAFWDNRA VQHYAVSDYF PRRRVMERAA
ILGDRPR