Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5721 |
Symbol | |
ID | 8337082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6603278 |
End bp | 6604108 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958825 |
Product | putative ABC transporter transmembrane protein |
Protein accession | YP_003116420 |
Protein GI | 256394856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG TCGCAGAAAC CGCCGCGCCA GCCCGGCGCG TCCACACCGG CAAGGTCACC CAGGGCCGGG TGATCAAGAG CGAGTGGATC AAGTTCCGCA CGCTGCGCTC CTCGCGCTGG TCGCTCATCG GCGGCGTCGG GGCGATGATC GCGATCGCGC TGCTGTTCAG CCTGGCGATG AAGAGCCACT ACCCGCACAT GAGCCATGCC CGCCAGCTGG AGGTCGACCC GGTCGCCGAC CCGATGCGCG GGGTGTTCCT CGGGCAGCTG GCGGTCGGCG TGCTCGGCGT CATGATGATC ACCGGGGAGT ACACCACCGG GATGATCCGC GCCTCGCTGG CCGCCGCGCC CAAGCGGCTG CCGGTGCTGT GGGCCAAGGC GCTGGTGTTC ACCGTCGTGG CCTGGACCGT CATGACGATC ACCGGCTTCG TCTGCTTCTT CCTGGCGCAG TCGATCTTCT CCTCGATCCA CCTGAACAAG TCCCTGTCCG ACCCCGGCGT GCTGCGCGCG GTCTTCGGCG AGGGCCTGTA CCTGACGGTG GTCGGGCTGC TCGGCGTGGC CCTCGGCGCG ATCATCCGCA GCACCGCCGG CGCCATCGCC TCGCTGTTCG GGATCCTGCT GGTGCTGCCG GTCCTCGGCG AGGTGCTGAA CCTCACCTCC TGGGGCGACC ACATCAACCC CTACCTGCCG AGCAACGCCG GACAGCAGGT GATGGCGCTG ACCACCAGCT CCCCGGACAT GAAGCCGTGG CCCGGCTTCC TGCTGTTCGT TGGCTACGCT GTGGTGGCGA TGGCCGCGGC GGCCGTCCTG CTGAAGAAAC GAGACGCGTG A
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Protein sequence | MTAVAETAAP ARRVHTGKVT QGRVIKSEWI KFRTLRSSRW SLIGGVGAMI AIALLFSLAM KSHYPHMSHA RQLEVDPVAD PMRGVFLGQL AVGVLGVMMI TGEYTTGMIR ASLAAAPKRL PVLWAKALVF TVVAWTVMTI TGFVCFFLAQ SIFSSIHLNK SLSDPGVLRA VFGEGLYLTV VGLLGVALGA IIRSTAGAIA SLFGILLVLP VLGEVLNLTS WGDHINPYLP SNAGQQVMAL TTSSPDMKPW PGFLLFVGYA VVAMAAAAVL LKKRDA
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