| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5709 |
|---|
| Symbol | |
|---|
| ID | 8337070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6590199 |
|---|
| End bp | 6591008 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644958813 |
|---|
| Product | tryptophan synthase, alpha subunit |
|---|
| Protein accession | YP_003116408 |
|---|
| Protein GI | 256394844 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCGGC TCCAGGACGT GCTCAAAAGC GCGCGGGCGG ACAACCGCGC GGTCCTCATC
GGCTACCTGC CCGCGGGCTA CCCGTCGGTC GACGGCTCCA TCGACGCCAT GCGCGCCATG
GTCGAGGGCG GCTGCGACAT CATCGAGGTC GGACTCCCGT ACTCCGACCC GGCGATGGAC
GGCCCGGTCA TCCAGGCCGC CGCCGACCAG GCGCTCAGCC GCGGGGTCAC CACCCCGGAC
GTGATCCGCG CGGCCGGCGC GGTCGCCGAC ACCGGCGCGG CGGCGCTGAT CATGTCGTAC
TGGAACCCGA TCGAGCACTA CGGCGTCGAG CGCTTCGCCG CCGAGCTGGC GGCGGTCGGC
GGCAGCGGCG TGATCACCCC GGACCTCATC CCCGAGGAGG CCGGTCCCTG GGTCGCCGCG
ACCGACGCGC ACGACATCGG CCGGGTGTTC CTGGTCGCGC CGAGCTCCAC CCCCGAGCGC
GTCGCGCTGA CCACCGAGGT GTGCAACGGC TTCGTGTACG CCGGTGCGGT GATGGGCGTC
ACCGGCGCCC GCGACCAGGT CGGGCACGCC GCCCGGGACC TGGTCGAACG CACGAGGAAG
GCGACGGACC AGGCGGTGTG CGTGGGCCTG GGGGTCTCCA CCGGCGACCA GGCCGCCGAG
ATCGCCGGGT ACGCCGACGG CGTGATCGTC GGCTCGGCCT TCGTCCGGCG GCTGCTGGAC
AACCGCGACC CGCGCAAGGG GGTCGAGGCG GTGCGCGAGC TGGCCGCCGA GCTCGCCGAC
GGGGTGCGGC GGGGGAGCAA GGCCCGCTGA
|
|---|
| Protein sequence | MNRLQDVLKS ARADNRAVLI GYLPAGYPSV DGSIDAMRAM VEGGCDIIEV GLPYSDPAMD
GPVIQAAADQ ALSRGVTTPD VIRAAGAVAD TGAAALIMSY WNPIEHYGVE RFAAELAAVG
GSGVITPDLI PEEAGPWVAA TDAHDIGRVF LVAPSSTPER VALTTEVCNG FVYAGAVMGV
TGARDQVGHA ARDLVERTRK ATDQAVCVGL GVSTGDQAAE IAGYADGVIV GSAFVRRLLD
NRDPRKGVEA VRELAAELAD GVRRGSKAR
|
|---|
| |