| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5691 |
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| Symbol | |
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| ID | 8337052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6567279 |
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| End bp | 6570149 |
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| Gene Length | 2871 bp |
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| Protein Length | 956 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958795 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003116390 |
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| Protein GI | 256394826 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATCG GGGTTCTCGG CCCGCTTTCG GTGGCCGCCG AGGCCGGTGA GGTCCGGGTG
ACCGGTCGCC GGAGACGGGC GTTGTTGGCG TTGCTGGCTC TACACGCCAA CCAGGTCGTC
CACACCGGGC GGCTGATCGA GACCGCGTGG GGTTCGGCTG CCGCTCCGAC CAGCTCCGAC
AGTCTCCCGA GCTACATACT CCGCCTGCGT CGGGCGCTCG GCGCGGAAAT CGGCGCGCGG
ATCCTCACCC GCCCCGGCGG CTATACGCTC GAGCTGGCCG AGGACGAGCT GGATCTGATC
CGGTTCCGAA CCCTGCGGTC GGCAGCCAAG GCCAAGGCGG ACTCCGGGGA CTGGCCCGGC
TTCCACGCCC TGGCCGAACA AGCCCTGGCA CAGTGGCGTG GCGATCCGCT GGCCGACATC
GTCACCGACG GTGAGATGCA GGAGGAGACG GAAGCGCTGT CGGCGGCGCA CCTGGAGCTC
TGGCGCGACC GGCTCGACGC CGGCCTGTTC CTGGGCAGGC ACGCCGAGGT CGCCGCCGAG
ACGGCGCCGC TGGTCGCGCG TCATCCGATG GACGAGCGGT TCCGAGAGCA GCGGATGCTC
GCGCTGTATC ACACCGGCCG CAGGACCCAG GCCCTGGCCG TCTTCCGCGA GGTCCGAAGG
CTGTTGGTCG ACGAGGTCGG AGTCGAGCCG GGTTCCCGGC TGGCCGAGAT ACACGCCCGG
ATCCTGCGTG GGGATCCGGA GCCCTCGGAA CCGCGGGCGT CCAGTCCGGC CACAGTGACC
GTCGCGCATC CCGCCCCCCG GCAGCTGCCG CCCGCTCCGC TCCGCTTCAC CGCACGCCAC
GAGCCGATCG CGGCTCTGGA CCAGTGGATC GCGACTGCCG GCCGGACGGC CGGCACCGTG
GCGGTCGTCA GCGGGCCGCC CGGCGTCGGG AAGACCGCTT TGGCCGTGCA CTTCGCGCAC
ACCATCGCCG ACCGCTTCCC CGACGGTCAG ATCTACCTGA ATCTGCGGGG ATTCGACCCC
CTCGAACCGC CGGTGGCGGC GGCGACAGCC ATGCGCGACG TACTCGTTGC TCTCGGAATG
CCGTCCGGGG CGGTGCCTAC CGAACCGGCC GCGCTACTGG CGTTGTACCG GAGCCGGCTC
AGCGGCGGCC GGATGCTTCT GGTGTTGGAC AACGCCCGGG ACGCGGCCCA AGTCCGGTCT
CTGATACCGG CCGGTCCCGG CAGCATCGTC GTGGTGACCA GCCGGGACCG GCTGTTCGGA
CTGATCGCGG TGGACGGTGG AGTGGCGCTG CCGCTGGATG CGCTGACACC CGCGGAATCG
GCGCAGCTGC TGGCCGGGCG GCTGGGCGCG ACCACGGTGC GAGAGCACAG GGCCGCGGCG
GAGGAGATGG CTCAGCTGTG CTCGCACCTC CCGCTGGCCT TGACCATCGC GGCTGCTCGT
GCTGCCGCGC ACCCCACGAT CCCGCTGGCG AACTGGGTGA GCGAGCTCCG CCGGGCCGAC
AGACGTCTGG ACATGCTCAC CACCGGCGAC CGTGACTCCA ACGTCCGTAC CGTGTTCTCC
TCGTCGTACC ATGCGCTCAG TACGTCTGCG GGCACTGTGT TCCGGTTCCT GAGCCTGCAC
CCCGGACCGG AGATCGGCGC TGCCGCGGCC CGCGCGCTGA CCGGGCTGCC GGACCGCGAG
GCCCGTGGCG CACTGGACGA ACTGACCCGG GCGAGCCTTG TGGCCGAGAC GGTCCCGGGC
CGGTTCGCGG GACACGACCT GCTGCGCGAG TACGCCGCCG AACTCGGGCA AGAGCACGAT
CCGGAATTCG CGCGCCGGTC CGGGATACAG CGACTGCTGG ACTACTACCT CCACAGCGCA
CATGCCGTGC TGACCCCGTC CTATGCGCAG CGGCTCGCGC TCGAGCTGGC GGCTCCGGTC
CCCGGCGCGC ACCCCGAGCA GTTCCTCGAC CGTCAGCAGG GCCGCGCCTG GCGCGACACC
GAGTCCCGGG CATTGATCGC CGCGGTCCCG CTGGCGGCCC GAGCCGGCCT GGACCGGCAC
GCCTGGCAGC TGGCCACCGT GCTGGCCGGC CACTTGGGCT TCGTCGGCCT GCGGCAGGAA
CAGATGGACG TGGCCGCGGC CGGTCTGGCC GCGGCCTCCC TGGACGGGGA TCCGGTCGGG
CTCGGGCTCA GCCATATGCA CGTCGCCGAG GCGCACGCCG CGCAGGGGCA GGACGTCGAA
GCGCTCGAGC ACCTCGACAA GGCCCTGGAG TACTTCGTCG ATCTGGGTGA GGCATCCTGG
CAGGGCATGG TCCTGCTGTA CGTCAGCCAG GCCTGTGAAC GGCGCGCGGA CTTCACGGCG
GCACTTGATG CCGCTCAGCG GGCCTCAGTG CTCCTGGCAA GCGTCGACGA TCCGGACGGG
CAGGCTCAGG CGTTGAACAA CGCCGGGCAT TATCACACCG AGCTGGGCCG CCCCGACCTG
GGGCTGGAGC ACGCGGAACG GGCCCTGGCA CTGACTCGGG AGGTCGGTAA CCGATTCGCC
GAGTTCGCCG TGCTCGACAC GCTGATCGTG GCCCACGATC GGCTGGGCGA TCCGAAGTCC
GCCGTCGCCT GCGGCCGGAA AGCCGCGCAG ATCGCCGACC AGCTCGGCCC GACACCGCAT
CTCGCCGTGG TTCTGGACCA CCTCGCTCAG GCTCATTGGA ACGGAGGCGA CACCGCCGAG
GCCCGCACTG CCTGGCAGTC GGCGCTGGCG ATCATGGAGG AGCATCAGGA CCCGAAGGCG
GACGAGCTGC GCAGACGCCT GTCCGGTCTG CGTGAGCCGA CCGGAGGGCT GGACGGAGGT
GGACGGGAAT CGAACCCGCC GGACGGGGAT TCCCCGTCCC ACCCGCTTTG A
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| Protein sequence | MQIGVLGPLS VAAEAGEVRV TGRRRRALLA LLALHANQVV HTGRLIETAW GSAAAPTSSD
SLPSYILRLR RALGAEIGAR ILTRPGGYTL ELAEDELDLI RFRTLRSAAK AKADSGDWPG
FHALAEQALA QWRGDPLADI VTDGEMQEET EALSAAHLEL WRDRLDAGLF LGRHAEVAAE
TAPLVARHPM DERFREQRML ALYHTGRRTQ ALAVFREVRR LLVDEVGVEP GSRLAEIHAR
ILRGDPEPSE PRASSPATVT VAHPAPRQLP PAPLRFTARH EPIAALDQWI ATAGRTAGTV
AVVSGPPGVG KTALAVHFAH TIADRFPDGQ IYLNLRGFDP LEPPVAAATA MRDVLVALGM
PSGAVPTEPA ALLALYRSRL SGGRMLLVLD NARDAAQVRS LIPAGPGSIV VVTSRDRLFG
LIAVDGGVAL PLDALTPAES AQLLAGRLGA TTVREHRAAA EEMAQLCSHL PLALTIAAAR
AAAHPTIPLA NWVSELRRAD RRLDMLTTGD RDSNVRTVFS SSYHALSTSA GTVFRFLSLH
PGPEIGAAAA RALTGLPDRE ARGALDELTR ASLVAETVPG RFAGHDLLRE YAAELGQEHD
PEFARRSGIQ RLLDYYLHSA HAVLTPSYAQ RLALELAAPV PGAHPEQFLD RQQGRAWRDT
ESRALIAAVP LAARAGLDRH AWQLATVLAG HLGFVGLRQE QMDVAAAGLA AASLDGDPVG
LGLSHMHVAE AHAAQGQDVE ALEHLDKALE YFVDLGEASW QGMVLLYVSQ ACERRADFTA
ALDAAQRASV LLASVDDPDG QAQALNNAGH YHTELGRPDL GLEHAERALA LTREVGNRFA
EFAVLDTLIV AHDRLGDPKS AVACGRKAAQ IADQLGPTPH LAVVLDHLAQ AHWNGGDTAE
ARTAWQSALA IMEEHQDPKA DELRRRLSGL REPTGGLDGG GRESNPPDGD SPSHPL
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