Gene Caci_5678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5678 
Symbol 
ID8337038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6552291 
End bp6552722 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content69% 
IMG OID644958781 
Productthioesterase superfamily protein 
Protein accessionYP_003116377 
Protein GI256394813 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.685734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAG ACCAGAACAA CCAGGTGTCC GAGGCCGACC AGCTCGCCGC GATGTTCAAC 
GAGATCGGCG CCGGCCACCT GACCGAGCGG ATGGACATCG TCATCACCTC CGCGACCAAG
GAGGAGATCG TCGCCACCAT GCCGGTCGCC GGCAACACCC AGGTCTACGG CCTGCTGCAC
GGCGGCGCCT CGGTGGTGCT GGCCGAGACC CTGGGCTCGC TGATGGCCGC GCTGCACGCC
GGCTCGGACA AGCAGGTGGT CGGGGTGGAC ATCAACGCCA CCCACCACCG CGCGGCCAAG
GAGGGTCTGG TCACCGGGAC CTGCCGGACG CTGCACGTCG GACGCACGCT GGTGGTCAGC
GAGATCGTGG TCGCCGACGA GGCCGGGCGG CGGGTCTGCA CCAGCCGCAT CACCTGTCTG
GTGAAGGAAT AG
 
Protein sequence
MSIDQNNQVS EADQLAAMFN EIGAGHLTER MDIVITSATK EEIVATMPVA GNTQVYGLLH 
GGASVVLAET LGSLMAALHA GSDKQVVGVD INATHHRAAK EGLVTGTCRT LHVGRTLVVS
EIVVADEAGR RVCTSRITCL VKE