Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5667 |
Symbol | |
ID | 8337027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6535374 |
End bp | 6537128 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958771 |
Product | hypothetical protein |
Protein accession | YP_003116367 |
Protein GI | 256394803 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.438933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0908337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAGC GGGATGCCGC GGCGGGAAAC GCTAAGGGGG GAGCGCGTTG GAAGACCGTC ACGGGTTCGG CCGCCTTCGC CACCGCTGTG TTCGCCCTCG GTTACAGCTG CACCGGGACG TCGGCACCGA CCGCGGTCAG CGCCGGCCCT CCGGTGAAGA TCGCCGTCCA GACCCCGGAG CAGCCCAACG CCAGGGGGAA GCTTCCTCAG GACCGCACCA GGCCGTCCAC GGCGCCGTGC GCGACCGTGG TCCGGCCAGC CGGCTGGTCC CGGCTGGAGA ACGCCAAGCG GGGTGACTCC TCGTGGCGGT CCAGCTTCGA CGCGGACACG GACACGGTCG CCGGATACCT GGACCATGTG AGCGCCGCCT GTGGGGACAC CTTGGCGCTG CATCTGTCGG GCTATGTGTC CTCCGCCTCC GTGACCGCCT ACCGGATGGG TTGGTACGGC GGGGCGGGCG GGCGTGTGGT GTGGAGTTCT TCGCACGTCC CGGTCAGCGC CAGTCCGACG AAGAACTCCG GGTCGCCGAC GTACACGGTC GAGGCTTCCT GGCCGGTCGC CGAGCGCATC GAGGTCACGC CGGCTTGGAC GCCGGGCTAC TACCTGTTGG TGGTGCGCGC CGGGCCGCAT GACGCCGGGG ATGCGATCCC GCTGATCATT CGGGACGACA GTGCGGGCAA CGGAGCGGCG GGGACTGGGA GTTCGCCTCT GCTGTTGCAG GCGTCGGTCC TCACATATCA GGCGTACAAC AACTACGGAC GGTACAGCCT CTACTACGGA CCTAAGGACC AGTCCGCTAA GCGTTCGGAC CGTTCGCGGG TGGCTTCCTT CGACCGTCCG TACAACGGTG ACGGCTATCG CGCGCCGTTT CTATACGACA TCCCATTGGA GCAGGAGGCG GAGAAGCTCG GGCTGGATGT CGACTGCACG ACCGACATAG ATGTGGACGA GCGGCCCAGT CAGGTCGCGG CGCACAAGGG GTTGCTGGTC GGTGGTCACT CCGAGTACTG GACGCGGCGT ATGTATGACG CGGCGCTCTA TGCGCGGGAC AACGGGACCA ACATCGGCTT CTTCGGCGCG AACGAGATCT ACTGGCACGC GCGGCTGGAG CCGGCGCCGT CGGGTCCGGA CCGGCGGATG GCCGTCTACC GCTCCGCGAA CGAGGATCCG CTGGCCAAGC CCGATCCGTC GCAGGCGACC GTGCTATGGG ATTCCCCGCA GTTGCAGATG CCGGAGGCGT CGATAGTGGG TCCGGCTTAT GGGGAGCTGG GTGCGGACGG CGGGGCGTTC CGGGTGCTGC AGCCGGATTC GTGGATCTTC GCCGGGACCG GGGTCGTGAA GGACCAGGAG CTGAAGAACT CGCTCGGCGG CGAGTACGAC ACGGTGAAGA ACATCGCGGC GACCCCGCCG GACATAGACG TCATCGCGGC GGCGCCGATC GTGTTCAACG GCCAGTCGAC GATGGCGACG ATGTCGTACT ACACCGATCC GTCGGGCGCG GGCGTGTTCG CCGGCGGGAT GACGTACTGG GACTGCCAGA TGGCGCGCAT GTGCGGGGAC CGGCCGGTGG ATCCGCAGAC CGCGAACCTG CTGGCGGCGA TGACGGACAA CGTGCTGCGC GTCTACGCGG CCGGACCGGC CGGGCGGCGG TACCCCTCGG CGCACCGTCC GGCGCCGACC GCCCAGGCGC TGATCTCCAC GGCCCCCGCG CAGAGCGACG TCGGGATCGG GCCGCCGAAG CCCTCGGACG GGTAG
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Protein sequence | MEERDAAAGN AKGGARWKTV TGSAAFATAV FALGYSCTGT SAPTAVSAGP PVKIAVQTPE QPNARGKLPQ DRTRPSTAPC ATVVRPAGWS RLENAKRGDS SWRSSFDADT DTVAGYLDHV SAACGDTLAL HLSGYVSSAS VTAYRMGWYG GAGGRVVWSS SHVPVSASPT KNSGSPTYTV EASWPVAERI EVTPAWTPGY YLLVVRAGPH DAGDAIPLII RDDSAGNGAA GTGSSPLLLQ ASVLTYQAYN NYGRYSLYYG PKDQSAKRSD RSRVASFDRP YNGDGYRAPF LYDIPLEQEA EKLGLDVDCT TDIDVDERPS QVAAHKGLLV GGHSEYWTRR MYDAALYARD NGTNIGFFGA NEIYWHARLE PAPSGPDRRM AVYRSANEDP LAKPDPSQAT VLWDSPQLQM PEASIVGPAY GELGADGGAF RVLQPDSWIF AGTGVVKDQE LKNSLGGEYD TVKNIAATPP DIDVIAAAPI VFNGQSTMAT MSYYTDPSGA GVFAGGMTYW DCQMARMCGD RPVDPQTANL LAAMTDNVLR VYAAGPAGRR YPSAHRPAPT AQALISTAPA QSDVGIGPPK PSDG
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