Gene Caci_5667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5667 
Symbol 
ID8337027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6535374 
End bp6537128 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content69% 
IMG OID644958771 
Producthypothetical protein 
Protein accessionYP_003116367 
Protein GI256394803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.438933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0908337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAGC GGGATGCCGC GGCGGGAAAC GCTAAGGGGG GAGCGCGTTG GAAGACCGTC 
ACGGGTTCGG CCGCCTTCGC CACCGCTGTG TTCGCCCTCG GTTACAGCTG CACCGGGACG
TCGGCACCGA CCGCGGTCAG CGCCGGCCCT CCGGTGAAGA TCGCCGTCCA GACCCCGGAG
CAGCCCAACG CCAGGGGGAA GCTTCCTCAG GACCGCACCA GGCCGTCCAC GGCGCCGTGC
GCGACCGTGG TCCGGCCAGC CGGCTGGTCC CGGCTGGAGA ACGCCAAGCG GGGTGACTCC
TCGTGGCGGT CCAGCTTCGA CGCGGACACG GACACGGTCG CCGGATACCT GGACCATGTG
AGCGCCGCCT GTGGGGACAC CTTGGCGCTG CATCTGTCGG GCTATGTGTC CTCCGCCTCC
GTGACCGCCT ACCGGATGGG TTGGTACGGC GGGGCGGGCG GGCGTGTGGT GTGGAGTTCT
TCGCACGTCC CGGTCAGCGC CAGTCCGACG AAGAACTCCG GGTCGCCGAC GTACACGGTC
GAGGCTTCCT GGCCGGTCGC CGAGCGCATC GAGGTCACGC CGGCTTGGAC GCCGGGCTAC
TACCTGTTGG TGGTGCGCGC CGGGCCGCAT GACGCCGGGG ATGCGATCCC GCTGATCATT
CGGGACGACA GTGCGGGCAA CGGAGCGGCG GGGACTGGGA GTTCGCCTCT GCTGTTGCAG
GCGTCGGTCC TCACATATCA GGCGTACAAC AACTACGGAC GGTACAGCCT CTACTACGGA
CCTAAGGACC AGTCCGCTAA GCGTTCGGAC CGTTCGCGGG TGGCTTCCTT CGACCGTCCG
TACAACGGTG ACGGCTATCG CGCGCCGTTT CTATACGACA TCCCATTGGA GCAGGAGGCG
GAGAAGCTCG GGCTGGATGT CGACTGCACG ACCGACATAG ATGTGGACGA GCGGCCCAGT
CAGGTCGCGG CGCACAAGGG GTTGCTGGTC GGTGGTCACT CCGAGTACTG GACGCGGCGT
ATGTATGACG CGGCGCTCTA TGCGCGGGAC AACGGGACCA ACATCGGCTT CTTCGGCGCG
AACGAGATCT ACTGGCACGC GCGGCTGGAG CCGGCGCCGT CGGGTCCGGA CCGGCGGATG
GCCGTCTACC GCTCCGCGAA CGAGGATCCG CTGGCCAAGC CCGATCCGTC GCAGGCGACC
GTGCTATGGG ATTCCCCGCA GTTGCAGATG CCGGAGGCGT CGATAGTGGG TCCGGCTTAT
GGGGAGCTGG GTGCGGACGG CGGGGCGTTC CGGGTGCTGC AGCCGGATTC GTGGATCTTC
GCCGGGACCG GGGTCGTGAA GGACCAGGAG CTGAAGAACT CGCTCGGCGG CGAGTACGAC
ACGGTGAAGA ACATCGCGGC GACCCCGCCG GACATAGACG TCATCGCGGC GGCGCCGATC
GTGTTCAACG GCCAGTCGAC GATGGCGACG ATGTCGTACT ACACCGATCC GTCGGGCGCG
GGCGTGTTCG CCGGCGGGAT GACGTACTGG GACTGCCAGA TGGCGCGCAT GTGCGGGGAC
CGGCCGGTGG ATCCGCAGAC CGCGAACCTG CTGGCGGCGA TGACGGACAA CGTGCTGCGC
GTCTACGCGG CCGGACCGGC CGGGCGGCGG TACCCCTCGG CGCACCGTCC GGCGCCGACC
GCCCAGGCGC TGATCTCCAC GGCCCCCGCG CAGAGCGACG TCGGGATCGG GCCGCCGAAG
CCCTCGGACG GGTAG
 
Protein sequence
MEERDAAAGN AKGGARWKTV TGSAAFATAV FALGYSCTGT SAPTAVSAGP PVKIAVQTPE 
QPNARGKLPQ DRTRPSTAPC ATVVRPAGWS RLENAKRGDS SWRSSFDADT DTVAGYLDHV
SAACGDTLAL HLSGYVSSAS VTAYRMGWYG GAGGRVVWSS SHVPVSASPT KNSGSPTYTV
EASWPVAERI EVTPAWTPGY YLLVVRAGPH DAGDAIPLII RDDSAGNGAA GTGSSPLLLQ
ASVLTYQAYN NYGRYSLYYG PKDQSAKRSD RSRVASFDRP YNGDGYRAPF LYDIPLEQEA
EKLGLDVDCT TDIDVDERPS QVAAHKGLLV GGHSEYWTRR MYDAALYARD NGTNIGFFGA
NEIYWHARLE PAPSGPDRRM AVYRSANEDP LAKPDPSQAT VLWDSPQLQM PEASIVGPAY
GELGADGGAF RVLQPDSWIF AGTGVVKDQE LKNSLGGEYD TVKNIAATPP DIDVIAAAPI
VFNGQSTMAT MSYYTDPSGA GVFAGGMTYW DCQMARMCGD RPVDPQTANL LAAMTDNVLR
VYAAGPAGRR YPSAHRPAPT AQALISTAPA QSDVGIGPPK PSDG