Gene Caci_5664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5664 
Symbol 
ID8337024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6532200 
End bp6533606 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content71% 
IMG OID644958768 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003116364 
Protein GI256394800 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.125635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGGG ACGTGAGAGA CGTGGCTGTG CCACAGCAGA GTTCCACCGG CACCGGGGTG 
CACTCCGAGC GCCTCTACGG CTGGGGCATG ACCAGCCCCT CGGTCGCCGA CGTCGCCGAC
CCCACGGCGC TGGACCAGCT CGCCGAGCTG GTCGCCGGCG CCGGACCGCG CGGCGTCATC
GCCCGCGGCC TCGGGCGCTC CTACGGAGAC CCGGCGCAGA ACGGCGGCGG CCGGGTGGTG
CGCACCACCT CGCTCAACAA GATCCTCAAC ATCGACATCG AACGCGGGAT CGTCACCGCC
CAGGCCGGCG TCAGCCTGCA CCAGCTGATG GACACGATGC TGCCGCTGGG CTGGTTCGTG
CCGGTCACCC CGGGCACCCG CTACGTCACC GTGGGCGGCG CGATCGGCGC GGACATCCAC
GGCAAGAACC ACCACAGCGC CGGCACCTTC GGCCAGCACG TGCTGTCCAT GGACCTGCTG
GGCGCGGACG GGCAGATCCG CACCCTCACC CCGGCCACCG AGCCCGAGCT GTTCTGGGCC
ACCGCCGGCG GCATGGGCCT GACCGGGATC GTCACCCAGG CCACCATCGC CTTCAAGAAG
GTCGAGACGG CCCGCATCAA GGCCGACATC TGGCGCGCCC CGGACCTGGA CGGCGTCCTG
GCCGAACTGG CCGCCACCGA TGAGAAGTAC CCCTACACGG TGGCCTGGAT CGACTGCCTG
TCCACCGGCC GCAACCTCGG CCGCTCGGTG CTGACGTGCG GTGACTTCGC CAAGCTGGAC
GAGCTGCCGG CCAAGGCCCG CCGCGAGCCG CGCAAGTTCG CCCCGCTCTC GCTGGGCAAG
GTCCCGCCGG TCCCGGTCAG CGGTCTGCTG AACAAGATGA CCGGCCGCGC CTTCAACGAG
ATGTGGTTCC GCAAGGCGCC GGTCCGCAAG GAAGGCGTGA TCCAGGGCGT CGGCGCGTTC
TTCCACCCGC TGGACGGGAT CATGGAGTGG AACCGCGTCT ACGGCCCGGC GGGCTTCCTG
CAGTGGCAGT TCGTGGTCCC CTTCGGCGCC GAGGACACCC TGCGCCAGAT CGTCGAGCAG
ATCTCCGCGC ACGGAGCGCC GGCGGCCCTG ACCGTCCTCA AGCGCTTCGG CGAGGGCAGC
CCGGGCTACC TGTCCTTCCC CAGTAAGGGC TGGACGCTGG CCCTGGACTT CCCGACCAAC
ACCCCCGGCC TGGCGCAGCT GCTGGACGAC ATGGACGAGA AGGTCCTGGA GGCCGGCGGC
CGCCTGTACC TGGCGAAGGA CTCGCGCATG CGGCCGGAGC TGATGGCGGA GATGTACCCG
CGCCTGGAGG CGTTCCGCAA GCTGCGCGCC GAGATCGACC CGCACCAGGT GTTCATGTCG
GACCAGGCGC GCCGCCTGCA CCTGTAG
 
Protein sequence
MNRDVRDVAV PQQSSTGTGV HSERLYGWGM TSPSVADVAD PTALDQLAEL VAGAGPRGVI 
ARGLGRSYGD PAQNGGGRVV RTTSLNKILN IDIERGIVTA QAGVSLHQLM DTMLPLGWFV
PVTPGTRYVT VGGAIGADIH GKNHHSAGTF GQHVLSMDLL GADGQIRTLT PATEPELFWA
TAGGMGLTGI VTQATIAFKK VETARIKADI WRAPDLDGVL AELAATDEKY PYTVAWIDCL
STGRNLGRSV LTCGDFAKLD ELPAKARREP RKFAPLSLGK VPPVPVSGLL NKMTGRAFNE
MWFRKAPVRK EGVIQGVGAF FHPLDGIMEW NRVYGPAGFL QWQFVVPFGA EDTLRQIVEQ
ISAHGAPAAL TVLKRFGEGS PGYLSFPSKG WTLALDFPTN TPGLAQLLDD MDEKVLEAGG
RLYLAKDSRM RPELMAEMYP RLEAFRKLRA EIDPHQVFMS DQARRLHL