| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5661 |
|---|
| Symbol | |
|---|
| ID | 8337021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6528743 |
|---|
| End bp | 6530146 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958765 |
|---|
| Product | monooxygenase |
|---|
| Protein accession | YP_003116361 |
|---|
| Protein GI | 256394797 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.394617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC GCGCACCACG CCGGCTTCAC CTGAACGCAT TCCTGCATGC CCCCGGGCAC
CACGACGCCG CCTGGCGCCA CCCCGACAGC GGCGGCCACC GCGCCCTGGA CGTCGACTAC
CACATCGACC TGGCGCGCAC CGCCGAGCGC GGCCTGTTCG ACGCCGTCTT CCTCGCCGAC
ACCCTGGCGG TGCGCGGCCG GCCGGACGCC ACCGTCGCCG CCGGGCTGGA GCCCTTGACG
CTGCTGACCG CGCTGGCCAC GGCCACCGAG CACATCGGGC TGATCGCCAC CGCCTCGACG
ACCTTCTACG AGCCCTACAT CCTGGCGCGC ACCCTGGCCT CGCTGGACCA CATCTCGCAC
GGCCGCGCCG GCTGGAACGT GGCCGCCGGC GGCGATCTGG CCGAGGCCGC CAACTTCAAC
CTCGACGAGC CCATCGAGCA CACGGTGCGC TACGAGCGCG CGGCGGAGTT CCTGGACGTC
GCCACGCAGC TGTGGGACAG CTGGGCCGAC GACGCCGTGG TCCACGACCG CCGCGCCGGC
CGCTACGCCG ACCCCCAGCG CGTCCGCGAG GTGGCGCACA CCGGACTGTT CTTCAAGGTA
CGAGGACCGC TGAATGTCCA GCGCACGCCG CAGGGTTGGC CGCTGCTGGT ACACAGCGCC
TCCTCCGCCG AGGGCCAAGA GTTCGCGGCA CGCTACGCCG AAGTCGTCCT CACCGGCCAG
CAGAACCTCG GCGACGCCGC GGCGTTCGCA CTGGAGGTGA AATCGCGGGC GGCGGCGTAC
GGCCGGGAAG CCGACGTCCC GGTCATCATG CCGAGCATCG CGCCGGTCAT CGGCTCCACG
GAGACCGAGG CGCGCCGCCT GGCCCGGGAG CTGACCGAGC TGCACCTCGC CGAGCCCGGC
GTGAACCAGC TGTCGAATCT GCTCGGCATC GACGTGGCAG GGCTCGATCC TGAACGCCCC
ATCCCCGCCG GACTGCTGCC GCGCGAGGAG GATCTCGCCG ACCACCGCTT CGCACGCTCC
TGGCCGACAA CGACGACGCA GCTCACCGAC CTGGCGATCC GCGAGCGCCT GACCGTCCGC
CAGATCGTCG CGCGCCTCGG CGGCGGCCGC GGACACCGCA CGGTCGTCGG CACACCGGAG
CAGATCGCCG ACTCGATGCA GGAGTGGTCG CAAGCCGGAG CCGCCGACGG ATTCACCATC
GCCCCGCCGA TCCTGCCCAG CGGCCTGACC ACCTTCGTCG ACCAGGTGGT GCCGCTACTG
CAACGGCGCG GACTCTTCCG CACCGAATAC GACCTCGGAA CGCTGCGCGA GCGCTTCGGC
GTAGAGCGCC CCGAGGACCA CTTCCCCGAG CCGACACCGG CCACGCCGCG GCGGACAGCG
CGGCCACCAC TGGCTCGGGT CTGA
|
|---|
| Protein sequence | MPARAPRRLH LNAFLHAPGH HDAAWRHPDS GGHRALDVDY HIDLARTAER GLFDAVFLAD
TLAVRGRPDA TVAAGLEPLT LLTALATATE HIGLIATAST TFYEPYILAR TLASLDHISH
GRAGWNVAAG GDLAEAANFN LDEPIEHTVR YERAAEFLDV ATQLWDSWAD DAVVHDRRAG
RYADPQRVRE VAHTGLFFKV RGPLNVQRTP QGWPLLVHSA SSAEGQEFAA RYAEVVLTGQ
QNLGDAAAFA LEVKSRAAAY GREADVPVIM PSIAPVIGST ETEARRLARE LTELHLAEPG
VNQLSNLLGI DVAGLDPERP IPAGLLPREE DLADHRFARS WPTTTTQLTD LAIRERLTVR
QIVARLGGGR GHRTVVGTPE QIADSMQEWS QAGAADGFTI APPILPSGLT TFVDQVVPLL
QRRGLFRTEY DLGTLRERFG VERPEDHFPE PTPATPRRTA RPPLARV
|
|---|
| |