| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5656 |
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| Symbol | |
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| ID | 8337016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6519162 |
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| End bp | 6521636 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958760 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003116356 |
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| Protein GI | 256394792 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0407757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.559684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACTCC GCAAAACGCT CTTGGCAGCC CTCGCCGCCG GTGCGCTGGC CTGCGTCGGC
GCGGTGGCGC CGGGCAGTGC CTCGGCTGCG CCGCCCAGTG CCACGTACAC GGTCTCGATC
GGTTCCAACG GCACGTTTTC CGCGCAGTCG GACTCCCCTG CCGGGGCGTT CGTCGACCGT
GATGGCACGT TCTACTTCCA GGAGTCCTAC TCCGGTTACG GCTCGAGCGA CGGCCGGGTC
TGGCAGTTCT ACTCCGGCAG CGACTTCGAC AGCGCCAGCT TGAACTCCAC GATCAGCAAC
TCGGTGAACC CCGCGAACTC CCAGGACGCG AACAACAACA CCACCTGGCG CTGCGACAAC
AGTCCGACCG GGCTCGCGTC GACGAGTGCC GGGTCCGGTT CGGGCTACAC CCAGCCGAAC
TTCTGCGACC TGATCGGCAT GTGGGTCGAT CCCGACACCG GGAACTGGAT CGGGCTGGTG
CACAACGAGT TCACGCCGCA GCCCTTCGGC GACGGTCTGC ACTACGACGC CATCGACTAC
GCCGTGTCCA CCGACCGCGG CATGACCTGG AAGATCACCG GTCACGCGAT CACCTCGCCG
TACAGCACGA AGCGCAACGA CACGACGGCG TTCCCGAACC AGACCTACAA CTACGGCGAC
GGCGACCAGC GGCTGTATGT GGACACCGCG TCAGGCTACT TCTACGTCTA CTACGGTTCG
CGCGTCGTCC CCAAGGGCGG CGTCGGCGGC AGCACCGGCG GTCTGGCGCA CGTCGCACGC
GCCCCGATCA GCGGCAAGAT GGCGACCGGG ACCTGGCAGA AGTGGTACAA CGGCGCCTGG
TCGCAGCCGG GTGTCGGCGG CCTGGAGAGC AACATGGTGC CGGTCGACTC CACCAACCCG
ACCGGCTACA CCGCTCCGGC GCACGACTAC AACCCCGCCA ACACCGGGAC CGTGGACCAG
CAGGTGGCTG CCGGGCAGCT GCCGGCGAAG TCGCCGCTGT TCATCATGAA CATCACCTAT
GACGCCTACC TCGGCCTCTA CGTCGGCACG CCGGAGGTCG TGTCCGGGAC GCAGCCGCAG
CAGTACTACG TCACCGACGA CCTCTCGACG CAGAAGTGGT ACTACGTGGG CAACTCAGGA
TCGGCCTACA CACAGGGATC CTGGTATCGC TGGTTCGCCG ACAGCGGCGA CAAGTGGAAC
CCGACCATCG TCGGCAAGTC CTTCCGCGCC TACTGCTCGG TGGCGTGCGT GAACAACGCC
GGTTCGCTCT ACACCAACGA GACCATCGAC TCCACCGCCC CGGCGCAGCC GCCGGTGGAC
ACCACCAAGA CCTACACCAT CGGCACATCC GCAGGTCGGG TCCTGGCGCA GGTCTCGGGC
GGCTCGTCGG TGACGTCCGA CGCCGCGGCG AGCGGTTCGG CGCTGGAAGC GTGGCAGTTC
ACGGCGAACG GCGACGGTTC GTACCGCATC ACCAACGCCT CCACCGGCCA AGCGCTCGGC
GTCACCGCGG CGACCGCCGG CCGCGCCTGG GGCGCCGCCC CGACCGCGAC GGCACTGTCC
GGCGGGACCG GCAGCGTGGG ACAGCAATGG TGGATCGTGC CGGTGACCGG ACAGAGCGGG
AGCTACAAGC TGGTCAACAG GTACAGCGGC TTGGTGCTCG CGCTGTCGTC GAACACCTCG
CGGCTGGCGG AGACCACGCC GACGCGCGCC TGGACCGACA CCTCGGGCAC CGGCATCGGC
GGCGGACGGA CCGCGGCGGA GCAGACGTTG GCGTTCACGC CGGCGACGTC TTCGGGCACT
GAGACGGTGA CCGTGGCGAA TCCGGGGACG CAGACCACGA CCGTGAGCAC CGCGGTCTCG
CTGCAGATCA CGGCGTCGGA CAGCAAGAAC AAGGCTCTGA CATACTCCGC GACGGGCCTG
CCGGCCGGGC TGTCGATCAG CTCCGCCGGA AAGATCTCCG GCACGCCGAG CGCCACCGGT
TCGGCGAGCG TGACGGTGAC CGCCTCGTCC GGGACCGCGA CCGGTTCGAC GACGTTCACA
TGGACCGTGG GTCCGGCGGC GGCGAACCTG ACCGGTACGC ACACGCTGAC CGCGTCGGGG
CAGGCGCTGG ACGACCCGAA CCATTCCACG ACCACCGGGA CGCAGCTGGT CACCTGGTCG
CCGAACGGCG GGTCGAACCA GAACTGGGTC TTCACGCAGC AATCGGACGG CTCGTACCAG
ATCCAGAACC AGCAGTCGCA GCTGTGCATG GACGACAACG GCGGCTTCAC CACCGCCGGC
ACGTCGGTGA TCCAGTGGAC GTGCACGGGC AGCGCCAACC AGCACTGGAC GGCGACGCGG
CTGGCCGGCG GGGCGTACAC GTTGACGAAC GTGCACAGCG GTCTGCTGGT GACCACCGCC
TCGACGGCGA ACGGCGCGCT GGTCACGCAG GAGACGAACA GCGGCTCGGC GCTTCAGCAG
TGGACCGTCG GCTAG
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| Protein sequence | MRLRKTLLAA LAAGALACVG AVAPGSASAA PPSATYTVSI GSNGTFSAQS DSPAGAFVDR
DGTFYFQESY SGYGSSDGRV WQFYSGSDFD SASLNSTISN SVNPANSQDA NNNTTWRCDN
SPTGLASTSA GSGSGYTQPN FCDLIGMWVD PDTGNWIGLV HNEFTPQPFG DGLHYDAIDY
AVSTDRGMTW KITGHAITSP YSTKRNDTTA FPNQTYNYGD GDQRLYVDTA SGYFYVYYGS
RVVPKGGVGG STGGLAHVAR APISGKMATG TWQKWYNGAW SQPGVGGLES NMVPVDSTNP
TGYTAPAHDY NPANTGTVDQ QVAAGQLPAK SPLFIMNITY DAYLGLYVGT PEVVSGTQPQ
QYYVTDDLST QKWYYVGNSG SAYTQGSWYR WFADSGDKWN PTIVGKSFRA YCSVACVNNA
GSLYTNETID STAPAQPPVD TTKTYTIGTS AGRVLAQVSG GSSVTSDAAA SGSALEAWQF
TANGDGSYRI TNASTGQALG VTAATAGRAW GAAPTATALS GGTGSVGQQW WIVPVTGQSG
SYKLVNRYSG LVLALSSNTS RLAETTPTRA WTDTSGTGIG GGRTAAEQTL AFTPATSSGT
ETVTVANPGT QTTTVSTAVS LQITASDSKN KALTYSATGL PAGLSISSAG KISGTPSATG
SASVTVTASS GTATGSTTFT WTVGPAAANL TGTHTLTASG QALDDPNHST TTGTQLVTWS
PNGGSNQNWV FTQQSDGSYQ IQNQQSQLCM DDNGGFTTAG TSVIQWTCTG SANQHWTATR
LAGGAYTLTN VHSGLLVTTA STANGALVTQ ETNSGSALQQ WTVG
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