Gene Caci_5648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5648 
Symbol 
ID8337008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6508919 
End bp6509842 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID644958752 
Productprotein of unknown function DUF75 
Protein accessionYP_003116348 
Protein GI256394784 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.961809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.424673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCGC GCAAGGATCC GAAGGCTCTG TACGAGCTGG CGCCCGGCAC ACCGGGCATG 
GCCGGCGTGG TCTTGCTGCA CCAGATGGAA GGCTTCATGG ACGCCGGAGG CGCCGGCAGG
CTGGCCTCCG AGCACCTGCT GGACCAGTTC GACCACCGCC TGGTGGCCTC CTTCGACGTG
GACCGGCTCA TCGACTACCG CAGCCGGCGC CCCACGATGA CCTTCGACAA GGACCACTAC
GACCATTACG AGGACCCGGC GCTGGACGTG CACCTGCTCA CCGACGGCGA GGGCAAGCGC
TTCCTGCTCC TGGACGGCCT GGAGCCCGAC CGCGAGTGGG AACTGTTCGC CCAGGCCGTC
CGCAGCCTGA TCGAGCACTT CGACGTCAGC ATCACCGTGG GCATGCACGG CATCCCCATG
GGCATCCCCC ACACCCGCCC CCTGGGCATC ACCGCCCACG CCACCAACCC CGGCCTGGTC
GACACCGCCG ACCAGCCCGT CCTGGACCGC CTCCAGGTCC CCAGCTCAGC GGCGTCCCTG
CTGGAGTACC GCCTGGGCGA ATGGGGCCAC GACGCCGCCG GCTTCGCCGT CCACGTCCCC
CACTACCTGG CCTCCTCCCT GTATCCGCAA GCTGCCATCC GCCTCCTGCG CGCCGTCTCC
GAAGCCACCG GCCTGATCCT CCCCGACGTG GAACTCCGCG ACGCCGCCCG CCGCGCCTCC
GAAGACATCG AACGCCAGGT CCAGGAATCC TCCGAGGTCG AGGACGTCGT CCGCGCCCTC
GAGCGGCAGT ACGACGCCTT CAACGTGACC GACCGCAAGA ACCTGCTCAG CGACAACGAC
GGCCGGATGC CGACCGCGGA CGAACTGGCC GAGGAGTTCG AGCGGTTCCT GGCGGATCAG
GACGGTCCGC CGCCGAGCCC GTGA
 
Protein sequence
MVARKDPKAL YELAPGTPGM AGVVLLHQME GFMDAGGAGR LASEHLLDQF DHRLVASFDV 
DRLIDYRSRR PTMTFDKDHY DHYEDPALDV HLLTDGEGKR FLLLDGLEPD REWELFAQAV
RSLIEHFDVS ITVGMHGIPM GIPHTRPLGI TAHATNPGLV DTADQPVLDR LQVPSSAASL
LEYRLGEWGH DAAGFAVHVP HYLASSLYPQ AAIRLLRAVS EATGLILPDV ELRDAARRAS
EDIERQVQES SEVEDVVRAL ERQYDAFNVT DRKNLLSDND GRMPTADELA EEFERFLADQ
DGPPPSP