| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5642 |
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| Symbol | |
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| ID | 8337002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6501609 |
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| End bp | 6502502 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958746 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003116342 |
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| Protein GI | 256394778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.114154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG CTGATCAGCT CGCCCAGTTC TTCCAGACCC AGCGCCCGCA CCTGAAGGCG
GTGGCGTACC GCATGCTCGG GTCGCTGGCC GAGGCGGACG ACGCCGTGCA GGAGGCGTAC
CTGCGGCTGA ACCGGTCGGA CGTCGCCGAG GTGGAGAACC TGGCCGGCTG GCTCACGACG
GTGACCGGCC GGGTCTGCCT GGACGTCCTG CGCGCCCGCC GCAACCACGG CGAGGAGGAC
CTCGAGGGCC CGGCCGGCGT CGAGGCCGTC GAGGCCACGG AGCGCGACGC GATGGCCGAC
CCGGAACTGG CCGCCGAGCT GTCGGACTCC GTCGGCCTGG CACTGCTGGT CGTGATGGAC
ACCCTGAGCC CGGCCGAGCG CCTCTCGTTC GTCCTGCACG ACATGTTCGC AGTCCCCTTC
GAGGAGATCT CACCCATCGT CGGCAAATCC CCGGCAGCCG TCCGCCAACT CGCCAGCCGA
GCCCGCCGCC GCGTCCAGGG CCAAGGCGAG GCGTCCGACG CGGACCGCGG ACGCCAGCGC
GAGGTCGTGA GCGCCTTCCT GAAGGCATCA CGCGGCGGCG ACTTCGCCGG CCTGCTGAAG
CTCCTGGACC CCGACGTCGT CCTCCGCGGC GACCCGACAG CCGTCGCCTT CGGCGCCACC
GCCGAAGTCC GCGGCGCGGG CGGCGTCGCC AAGCAGTTCT CCGGCCGCGC CCAGGCCGCC
CAGCTCGCCC TCATCGACGG CACCCCCTCC CTGATCTGGG CCGTCGCCGG CACGCCCAAG
GTGGTCTTCG ACTTCACCAT CGTCAACGGC CGCATCGCCG CCATCGAGAT GCTCGCTAAC
AGCAGCCTCC TGGGCGAGCT GGCGGTGGAG ATCGTCGCGA GGGTGGGGGA GTAG
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| Protein sequence | MTDADQLAQF FQTQRPHLKA VAYRMLGSLA EADDAVQEAY LRLNRSDVAE VENLAGWLTT
VTGRVCLDVL RARRNHGEED LEGPAGVEAV EATERDAMAD PELAAELSDS VGLALLVVMD
TLSPAERLSF VLHDMFAVPF EEISPIVGKS PAAVRQLASR ARRRVQGQGE ASDADRGRQR
EVVSAFLKAS RGGDFAGLLK LLDPDVVLRG DPTAVAFGAT AEVRGAGGVA KQFSGRAQAA
QLALIDGTPS LIWAVAGTPK VVFDFTIVNG RIAAIEMLAN SSLLGELAVE IVARVGE
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