Gene Caci_5639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5639 
Symbol 
ID8336999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6499826 
End bp6500221 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content69% 
IMG OID644958743 
Producttranscriptional repressor, CopY family 
Protein accessionYP_003116339 
Protein GI256394775 
COG category[K] Transcription 
COG ID[COG3682] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0388648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAAC TGGGGGATCT GGAAGCGGCG GTCATGGACC GCATATGGCG GCGCAACCGC 
CCGGTGCTGG TGCGCGACAT CCTCGACGAC CTGAACACCG ACCGTTCCCT CGCCTACACC
ACGGTCATGA CGGTCATGGA CAAGCTGCAC CGCAAGGGGT GGCTGCGCCG TCAGCCGCAG
GGGCGGGCGT ACGTCTATGA GGCGGTCGCC TCGCGCGAGT CGTACACCGC GCGGCTGATG
CGGGACGCCT GGGCGACCAG CGACAACCAG GCGGTGGCGT TCGTCCACTT CCTGGAGCAG
CTGTCCGACG AGGAAGCCAA GGCGCTGCGC GCGGCGCTCG AGATCTGCCC ACCGGCGTCG
CCCCACCCGG CTCCGGAGGA AGAGCGGATG CAGTGA
 
Protein sequence
MRQLGDLEAA VMDRIWRRNR PVLVRDILDD LNTDRSLAYT TVMTVMDKLH RKGWLRRQPQ 
GRAYVYEAVA SRESYTARLM RDAWATSDNQ AVAFVHFLEQ LSDEEAKALR AALEICPPAS
PHPAPEEERM Q