Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5639 |
Symbol | |
ID | 8336999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6499826 |
End bp | 6500221 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958743 |
Product | transcriptional repressor, CopY family |
Protein accession | YP_003116339 |
Protein GI | 256394775 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0388648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACAAC TGGGGGATCT GGAAGCGGCG GTCATGGACC GCATATGGCG GCGCAACCGC CCGGTGCTGG TGCGCGACAT CCTCGACGAC CTGAACACCG ACCGTTCCCT CGCCTACACC ACGGTCATGA CGGTCATGGA CAAGCTGCAC CGCAAGGGGT GGCTGCGCCG TCAGCCGCAG GGGCGGGCGT ACGTCTATGA GGCGGTCGCC TCGCGCGAGT CGTACACCGC GCGGCTGATG CGGGACGCCT GGGCGACCAG CGACAACCAG GCGGTGGCGT TCGTCCACTT CCTGGAGCAG CTGTCCGACG AGGAAGCCAA GGCGCTGCGC GCGGCGCTCG AGATCTGCCC ACCGGCGTCG CCCCACCCGG CTCCGGAGGA AGAGCGGATG CAGTGA
|
Protein sequence | MRQLGDLEAA VMDRIWRRNR PVLVRDILDD LNTDRSLAYT TVMTVMDKLH RKGWLRRQPQ GRAYVYEAVA SRESYTARLM RDAWATSDNQ AVAFVHFLEQ LSDEEAKALR AALEICPPAS PHPAPEEERM Q
|
| |