Gene Caci_5615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5615 
Symbol 
ID8336975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6472353 
End bp6472832 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID644958719 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003116315 
Protein GI256394751 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.208156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.233969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC ACGTTGAGGT CGAGGAGTCG GGACCGGGCC GCCGGTCCGT CATGAAGGCC 
GCCGCTCTGG TCGCGGTGCC GGTGGCCGGG GTGGGCACGG TCGCGGCGTG CGCCAGCAGC
TCGTCGTCGA AGAGTTCGTC CTCCGGGAGC GGCGGCGGCA GCGGCAGCGG CAGCGGCAAC
GGCTCGGTGT CCGTGCCGGT GTCCTCGGTG CCGGTCGGCG GCGGCTACAT CGACAAGTCG
AACCTGGTCG TGGTGACGCA GCCGGAGGCC GGGCAGTACA AGGCGTTCAC CGCGGTGTGC
ACGCACCAGG GGTGCACGGT CGCCAGCGTC ACGAACAACC GGATCGTCTG CCCCTGCCAC
AGCTCGGTCT TCAGCGCGAC GGACGGCTCG GTGATCAACG GCCCGGCGAC CTCGCCGCTG
TCGGCGATGA CCGCCGCGGT GAACGGCGAG AACGTGGACG TCACCGGCGC GTCGAAGTAG
 
Protein sequence
MSDHVEVEES GPGRRSVMKA AALVAVPVAG VGTVAACASS SSSKSSSSGS GGGSGSGSGN 
GSVSVPVSSV PVGGGYIDKS NLVVVTQPEA GQYKAFTAVC THQGCTVASV TNNRIVCPCH
SSVFSATDGS VINGPATSPL SAMTAAVNGE NVDVTGASK