Gene Caci_5612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5612 
Symbol 
ID8336972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6468511 
End bp6469482 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID644958716 
Producthypothetical protein 
Protein accessionYP_003116312 
Protein GI256394748 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.367922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.384209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCGA ACAGGCCGAG CGGCAGGGAC GCGCAGGACG AGCCGGACCA GGCGGTCCAG 
GAGCCGGAAG GCTCCGAGGA CGCCGGGAAC GACGCGGCGC AGGACGGACC GCACGCTCCG
GAGCTGGTGA TCGTCACCGG CATGTCCGGA GCCGGCCGGT CCACCGCGGC GAAGATCTTC
GAGGACCTCG GCTGGTATGT GGTCGACAAC CTGGCGCCGA CGCTGATCGC GCCGATGATC
GACCTGGTGA TGCGCGAGTC GCGCAGCACC GACCGGCTGG CCTTCGTGGT GGACGTGCGC
GGCCGGGCGT TCTTCGACAC GCTGCGCAGC ACCCTGGACG AGCTGGACTC GGCCGGGCTG
AACCACCGCA TCGTGTTCCT GGAGTCCGAG GACGACGTGC TGATCCGCCG GTACGAGGGC
GTGCGCCGGC CGCATCCGCT GCAGGGCGAG GGCCGGGTCA CCGACGGCAT CGAGCGCGAG
CGCGAACTGC TGCGCGAGCT GCGCGGCGAG GCCGACCTGG TGATCGACAC CTCGGCACGC
AACGTGCACG AGCTGCGCAC GGCCATCGAG TCGGCGTTCG GCGACCCCGG CGAGGTGCCG
CTGCGGGCGA CCGTGATGAG TTTCGGATTC AAGTACGGAC TGCCCGTCGA CGCCGACCTC
GTCGCGGATG TACGGTTCTT GCCAAACCCG CACTGGGTGC CCGAGCTCCG TCCGCGCACG
GGTCAGGACC CTGAGGTGAG CGGGTACGTG CTGTCCCAGC ACGGGGCCAA GGAGTTCCTC
GAACGGTACG CGGAGGTACT GAACATCATC ACCGAGGGAT ACCGCCGCGA GGGCAAGCGC
TACATGACCC TGGCGATCGG CTGCACCGGC GGCAAGCACC GCAGCGTCGC GATGTCCGAG
CAGATCGCCG CGCGGCTGTC CGCCGAGGGC GTGGACACCC AGGTGGTGCA CCGCGACATG
GGTCGCGAGT GA
 
Protein sequence
MRANRPSGRD AQDEPDQAVQ EPEGSEDAGN DAAQDGPHAP ELVIVTGMSG AGRSTAAKIF 
EDLGWYVVDN LAPTLIAPMI DLVMRESRST DRLAFVVDVR GRAFFDTLRS TLDELDSAGL
NHRIVFLESE DDVLIRRYEG VRRPHPLQGE GRVTDGIERE RELLRELRGE ADLVIDTSAR
NVHELRTAIE SAFGDPGEVP LRATVMSFGF KYGLPVDADL VADVRFLPNP HWVPELRPRT
GQDPEVSGYV LSQHGAKEFL ERYAEVLNII TEGYRREGKR YMTLAIGCTG GKHRSVAMSE
QIAARLSAEG VDTQVVHRDM GRE