| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5611 |
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| Symbol | |
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| ID | 8336971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6467228 |
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| End bp | 6468514 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644958715 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_003116311 |
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| Protein GI | 256394747 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.796234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.406938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGG GCGACCGGGC GGATTCCAGG CGCGTCATAC AGAACGAGGT GGTTCCGACC
ATCTCGGGGA ACCTGTTCCG CCCGGACCCG GCGACCCCCC TGGCTCCCGG CACGAATGCT
GTCCCCGGCG CTCACGCGGT TTCCGGTGCT CACGCGGCTC CGCCCGGCGG GAACCCGCTC
GGCGGCACGG TCCCGCCGCC GCTGCCCGGA ACGCCGATGA CCGGAGCCGC GGCGGCTGCC
GCGCACTGGT CCGACCCGGC TCTGGAGGAC GCGCCGACCG TCGAGTTCAA GGCGTACAAC
ATGGCCGTCG ACGGCCGTCC GGCGCCGAGC GTGGTGGCCC TGGGCGGCGG GCACGGCCTG
TCGGCGACCC TGGCCGCGCT GCGCACCGTC ACCGACGCCC TGACCGCGAT CGTCACCGTC
GCCGACAACG GCGGCTCCTC CGGGCGCATC CGGCGCGAAC TCGGCGGGCT GCCGCCGGGC
GACCTGCGGA TGGCGCTGGC CGCGCTGTGC GGCGACGACG AGTGGGGACG CACCTGGGCC
GACGTCCTGC AGCACCGCTT CGGCGGTCCG TCCGAGGGCG GACTGCACGG CCACGCGGTC
GGCAACCTGC TCATCGCCGC GCTGTGGGAG CGGCTCGGCG ACCCGGTCCG CGCCCTGGAC
TGGGTCGGAC GGCTGCTCGG CGCGCGCGGC CGGGTGCTGC CGATGTCGAC GGTGCCGCTG
GAGATCGAGG CCCTGGTGGC CGGCGCGGAC CCGGCCGCCC CCGGCGCCAC CGGCGTCATC
CGCGGCCAGC ACGAGCTGGC GGTGACGCCC GGCCGCGTGC TCTCGGTCCG GCTGAGCCCG
CCGGAGCCGC CCGCCGCGCC CGAGGCCGCC GCCGCGATCC GCGCCGCCGA CTGGACGGTC
CTGGGCCCGG GCTCCTGGTT CACCAGCGTC ATCCCGCACC TGCTGGTCCC CGAACTGTGC
GCGGCGCTGG CCGAGACCAA GGCGCGCAAG CTGCTGGTCT TCAACCTGTC CCCGCAGCCC
GGCGAGACCG ACGGCTTCTC CGCCGAGCAG CACATCGAGG TCCTGGCCGA CCATTGCCCG
GGCCTGCGCC TGGACCTGGT CCTGGCCGAC GAGACGTCCT GCGGCGCGCC GCGCGTCCAC
GGCCCGATGG AGAAGGCCGC CGCGGCGCTC GGCGCGCGGG TGGTGCTGGC GCCGCTCGCC
GCGCCGTACC GGGCCGGGGA CAAGAGCCCG CGGCACGATC ACGCGCTGCT GGCGCGGGCC
TTCCGCGGGG TCTTCGCCCA GGGCTGA
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| Protein sequence | MIPGDRADSR RVIQNEVVPT ISGNLFRPDP ATPLAPGTNA VPGAHAVSGA HAAPPGGNPL
GGTVPPPLPG TPMTGAAAAA AHWSDPALED APTVEFKAYN MAVDGRPAPS VVALGGGHGL
SATLAALRTV TDALTAIVTV ADNGGSSGRI RRELGGLPPG DLRMALAALC GDDEWGRTWA
DVLQHRFGGP SEGGLHGHAV GNLLIAALWE RLGDPVRALD WVGRLLGARG RVLPMSTVPL
EIEALVAGAD PAAPGATGVI RGQHELAVTP GRVLSVRLSP PEPPAAPEAA AAIRAADWTV
LGPGSWFTSV IPHLLVPELC AALAETKARK LLVFNLSPQP GETDGFSAEQ HIEVLADHCP
GLRLDLVLAD ETSCGAPRVH GPMEKAAAAL GARVVLAPLA APYRAGDKSP RHDHALLARA
FRGVFAQG
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