Gene Caci_5608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5608 
Symbol 
ID8336968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp6463660 
End bp6464685 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID644958712 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003116308 
Protein GI256394744 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.32419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC GGGTAGGCAT CAACGGATTC GGCCGCATCG GCCGCAACTT CTTCCACGCG 
ATCGTCGCCT CGGGTGCTGA CGTCGAGGTC GTGGGGATCA ACGACCTCGC TGCCGCCCCG 
ATCCTGGCGC ACTTCCTGAA GTACGACTCG ATCCTGGGCC GCTTCGACGG CACCATCGAG 
TCCGCCGAGG GCGAGCTGAT CGTCAACGGC AAGACCATCA AGGTGCTCTC CGAGCGCGAC 
CCCGCGGCGC TGCCGTGGAA GGAACTCGGC GTGGACGTGG TCGTGGAGTC CACGGGCCTG 
TTCACCAACG GCGACGACGC GCGCAAGCAC ATCGAGGCCG GTGCCAAGAA GGTCATCATC 
TCCGCGCCGG CCACCAACGA CGACGTCACC ATCGTGATGG GCGTCAACCA GGACAAGTAC 
GACGCGGCGA ACCACAACGT CATCTCCAAC GCCTCGTGCA CCACCAACTG CCTGGCGCCG 
CTGGTGAAGG TCCTGCTCGA CGAGTTCGGC ATCGAGCGCG GCTACATGAC CACCGTGCAC 
GCCTTCACCA CCGAGCAGCA GCTGCTCGAC CAGATCGCGC TGACCCGCAA GGGCACCATC 
GACCTGCGCC GCGCCCGCAG CGCCCCGCAG TCGATCATCC CGACCTCCAC CGGCGCGGCC 
AAGGCCATCG GCCTGGTCAT CCCGGAGGTC AAGGGCAAGC TCGACGGCTT CGCGATGCGC 
GTGCCGGTCC CGACCGGGTC GGTCACCGAC CTGACCGTGG ACCTGGGCCG GGAGACCACC 
AAGGACGAGA TCAACGCGGC GTTCAAGAAG GCCGCCGAGA CCGGTCCGCT CAAGGGTTTC 
CTGAAGTACA CCGAGGACGA GATCGTCTCC CGCGACATCG TCACCGACCC GCACAGCTGC 
ATCTTCGACA GCAAGCTGAC GATGGCCAAC GGCAACCAGG TCAAGGTCGT CGGCTGGTAC 
GACAACGAGT GGGGCTACTC CAACCGCCTC GTGGACCTCG TCGCCTTCGT CGGCGCCTCG 
CTGTAG
 
Protein sequence
MTVRVGINGF GRIGRNFFHA IVASGADVEV VGINDLAAAP ILAHFLKYDS ILGRFDGTIE 
SAEGELIVNG KTIKVLSERD PAALPWKELG VDVVVESTGL FTNGDDARKH IEAGAKKVII 
SAPATNDDVT IVMGVNQDKY DAANHNVISN ASCTTNCLAP LVKVLLDEFG IERGYMTTVH 
AFTTEQQLLD QIALTRKGTI DLRRARSAPQ SIIPTSTGAA KAIGLVIPEV KGKLDGFAMR 
VPVPTGSVTD LTVDLGRETT KDEINAAFKK AAETGPLKGF LKYTEDEIVS RDIVTDPHSC 
IFDSKLTMAN GNQVKVVGWY DNEWGYSNRL VDLVAFVGAS L