Gene Caci_5606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5606 
Symbol 
ID8336966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6461585 
End bp6462376 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID644958710 
Producttriosephosphate isomerase 
Protein accessionYP_003116306 
Protein GI256394742 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.245433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.85925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC GCAAGCCGTT GATGGCTGGC AACTGGAAGA TGAACCTCAA CCACTTCGAG 
GCCATGAAGC ACGTCCAGGA GTTGGCGTTC TCGCTGACGG ACAAGGACTT CGACGCCGTC
GACGTGGCGG TTCTGGTGCC CTTCACCGAC CTCCGCTCGG TCCAGACCCT GGTGCAGGGC
GACAAGCTGC GCATCCAGTA CGGCGCGCAG GACGTCTCCC AGCACCCCTC GGGCGCCTAC
ACCGGCGACA TCTCCGCGCC GATGCTGGCC AAGCTGGACT GCCACTACGT GATCGTCGGC
CACTCCGAGC GCCGCCAGTA CCACGGCGAG ACCGACGCGC TGGTCGCGGC CAAGGCCGTC
GCCGCGCGCA AGCACGGGAT CACGCCGATC GTCTGCGTCG GGGAGCACCT GCAGGTCCGC
AAGGACGGCG CGCACGTCGC GCACTGTGTC GAGCAGACCC GCGGCTCGCT CGCCGGGCTC
AGCGCCGAGC AGGTCCAGGC CTCGGTCATC GCCTACGAGC CGGTCTGGGC GATCGGCACC
GGCGAGGTCG CGACGCCGGA GGACGCCCAG GAGGTGTGCG CCGCGATCCG GACCGAGCTG
GCCACGCTGT TCGACGAGAG CGTCGCGGCG AACACCCGGA TTCTCTACGG CGGCTCGGTG
AAGGGCGCCA ACGCCGCCGA GCTGATGGCG CAGCCCGACG TCGACGGCGC GCTGGTCGGC
GGGGCGTCGC TGGACGCCGC GGACTTCACG CGGATCGTGC GTTTCAGGGA TTCTGCTGTC
GCCGCTGGCT GA
 
Protein sequence
MTDRKPLMAG NWKMNLNHFE AMKHVQELAF SLTDKDFDAV DVAVLVPFTD LRSVQTLVQG 
DKLRIQYGAQ DVSQHPSGAY TGDISAPMLA KLDCHYVIVG HSERRQYHGE TDALVAAKAV
AARKHGITPI VCVGEHLQVR KDGAHVAHCV EQTRGSLAGL SAEQVQASVI AYEPVWAIGT
GEVATPEDAQ EVCAAIRTEL ATLFDESVAA NTRILYGGSV KGANAAELMA QPDVDGALVG
GASLDAADFT RIVRFRDSAV AAG