Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5606 |
Symbol | |
ID | 8336966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6461585 |
End bp | 6462376 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958710 |
Product | triosephosphate isomerase |
Protein accession | YP_003116306 |
Protein GI | 256394742 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.245433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.85925 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACC GCAAGCCGTT GATGGCTGGC AACTGGAAGA TGAACCTCAA CCACTTCGAG GCCATGAAGC ACGTCCAGGA GTTGGCGTTC TCGCTGACGG ACAAGGACTT CGACGCCGTC GACGTGGCGG TTCTGGTGCC CTTCACCGAC CTCCGCTCGG TCCAGACCCT GGTGCAGGGC GACAAGCTGC GCATCCAGTA CGGCGCGCAG GACGTCTCCC AGCACCCCTC GGGCGCCTAC ACCGGCGACA TCTCCGCGCC GATGCTGGCC AAGCTGGACT GCCACTACGT GATCGTCGGC CACTCCGAGC GCCGCCAGTA CCACGGCGAG ACCGACGCGC TGGTCGCGGC CAAGGCCGTC GCCGCGCGCA AGCACGGGAT CACGCCGATC GTCTGCGTCG GGGAGCACCT GCAGGTCCGC AAGGACGGCG CGCACGTCGC GCACTGTGTC GAGCAGACCC GCGGCTCGCT CGCCGGGCTC AGCGCCGAGC AGGTCCAGGC CTCGGTCATC GCCTACGAGC CGGTCTGGGC GATCGGCACC GGCGAGGTCG CGACGCCGGA GGACGCCCAG GAGGTGTGCG CCGCGATCCG GACCGAGCTG GCCACGCTGT TCGACGAGAG CGTCGCGGCG AACACCCGGA TTCTCTACGG CGGCTCGGTG AAGGGCGCCA ACGCCGCCGA GCTGATGGCG CAGCCCGACG TCGACGGCGC GCTGGTCGGC GGGGCGTCGC TGGACGCCGC GGACTTCACG CGGATCGTGC GTTTCAGGGA TTCTGCTGTC GCCGCTGGCT GA
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Protein sequence | MTDRKPLMAG NWKMNLNHFE AMKHVQELAF SLTDKDFDAV DVAVLVPFTD LRSVQTLVQG DKLRIQYGAQ DVSQHPSGAY TGDISAPMLA KLDCHYVIVG HSERRQYHGE TDALVAAKAV AARKHGITPI VCVGEHLQVR KDGAHVAHCV EQTRGSLAGL SAEQVQASVI AYEPVWAIGT GEVATPEDAQ EVCAAIRTEL ATLFDESVAA NTRILYGGSV KGANAAELMA QPDVDGALVG GASLDAADFT RIVRFRDSAV AAG
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