| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5604 |
|---|
| Symbol | |
|---|
| ID | 8336964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6460355 |
|---|
| End bp | 6461161 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958708 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003116304 |
|---|
| Protein GI | 256394740 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.16228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATA CCTCAGTGTC CTTCTACGCC GGTCGCGACG GAGCGCGCCT CGCCTACCGC
GAGCTGGGCG AAGGCAGACC GCTGGTGCTG CTGCACGGGG CGATCGGCGA CGGGACGATG
TGGACGCGGC ACGGGCAGGC TGAGACGTTC GCAGGGCACG GATATCGCGT GATCCTGCCG
GACTTTCGCG GACATGGCAG CAGCGACAAG CCGCAAGGCG CCGATGCCTA TCCCGGCGAC
ATCCTGACCG ACGACGCCCT CGCGCTGCTG GAGCACCTCG GGCTCGAAGA GCCGGAAGCC
AAGACGGAAA CGGACTCCCT GCACACCCCG GCCGCCTACG ACCTCGGCGG CTACTCCCTC
GGCGCGCGCA TCGTCGTGCG CATGCTGGTG CGCGGTGCGA CACCGGGGCG TGCGGTGGTC
GCCGGCCAGG GTCTCCAGCA GGTGCTCGGG TTCGGCGGCG GCGTGGGAGA GATGCTGCGG
CGGATCGTCA CCGCGACCGA GCCCTTCGAG CCGGGCTCGC AGGACGAGCG GACCGCGGCG
TGGCTGAAGG CCGGTGAGGA GGACCCGGTC GCGCTGCTGC ACGCGGTGGA GTCCGTCGTG
GCCACGCCGG TGGAGGACCT GAGCCGCGTT CAGGTCCCGA CGCTGGTGGC GATGGGAACC
GAGGACGCGC GCGCGGAATC GTACGAGGCA CTGATCGCCG CCCTGCCCAA CGCCGCCGGA
GCGCGAATGC CCGGGAACCA CGGCAGCGCG GCAGCCGCGC CGGAACTGGT CACAGCGATG
GTGGAGTTCC TCACCGCCCA GAGGTGA
|
|---|
| Protein sequence | MPNTSVSFYA GRDGARLAYR ELGEGRPLVL LHGAIGDGTM WTRHGQAETF AGHGYRVILP
DFRGHGSSDK PQGADAYPGD ILTDDALALL EHLGLEEPEA KTETDSLHTP AAYDLGGYSL
GARIVVRMLV RGATPGRAVV AGQGLQQVLG FGGGVGEMLR RIVTATEPFE PGSQDERTAA
WLKAGEEDPV ALLHAVESVV ATPVEDLSRV QVPTLVAMGT EDARAESYEA LIAALPNAAG
ARMPGNHGSA AAAPELVTAM VEFLTAQR
|
|---|
| |