Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5603 |
Symbol | |
ID | 8336963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6459093 |
End bp | 6460223 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958707 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_003116303 |
Protein GI | 256394739 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.069875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.939883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTG CCATATCCAA GAAATCGGCT GCGACGAAGA TGCTGATCGT GGCCGCCGCC GGCGCCCTGA GCCTGACCGC GCTGAGCGCC TGCTCGTCCT CGAAGAGCTC GAGCAGCTCC GCGGCCTCCG GCACCGCCGG CGTCTCGAAG ACCACGCAGC ACGTCACGCT GATGGTCGGC GGCATCGACA AGCAGATCTA CCTGCCCTAC AAGCTCGCCG ACCAGCTCGG CTTCTACAAG AAGTACAACG TCGACGTCAC GCTGAGCACC GAGCAGGACG GCGGCGTCGG CGCCGAGGAG GCCATGGTCT CCGGCCAGGT CGACATGGCC GGCGCGTGGT ACAACCACGC GATCGACTTC CAGATGAAGC ACAAGAACGT CGAGGACCTC GTGCAGCTCT CCGGTGCCCC CGGCGAGCGC GAGATGTGCG GCAACAAGGC CACTGTGCAC ACCGGGGCAG ACTTCGCGGG CAAGACGATG GGCGTCACCG ACCTGGGCTC GGGCACCGAC ACCCTGACCC AGCTGATCGC GGCGCAGAGC GGCGTGGCCA AGAACAAGTT CAGCCGCACC GGCGTCGGCG CCGGCTCCAC GGCGCTGGCC GCGCTGAAGA ACGGCTCCAT CTCCTGCGTC ATGACCACCC AGCCGACGGT CACCGCCATC GAGAAGCAGA ACCTCGGCTA CTCCGCGATC GACCTGGCCA CCACCGAGGG CGCCACCAAG GCCCTGGGCG GCGCGTGGCC CGCGGCCGGC GTGCTGGCCC GCACCGACTG GGCCAACCAG CACCAGGAGG CCGTGCAGGA CGTGGTGGAC GCCCTGGTGG CCACCATGCA CTGGATCAGC ACGCACTCGG CGACCGACAT CGCCAACGCC CTGCCGGCGA GCTACACGAA CAACGCGATC ATCTCCAAGG CCGACTACAT CGCCGGCCTG ACCATGGACA AGAGCCAGTT CCTGCCCGAC GGCATCATGC CCGCCGGCGG CCCGAAGGTG GTCCTGACCA CCGAGAAGCT GATCGGCAAC GCCGACGACT CGGTGAACCT CGGCGCCACG TTCACGAACA CCTACGCGAT CAAGGCCAAC CAGCTCGAGG GCTTCACGAC CACCACGACG CCGGCCGGTC CCACCGGCTG A
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Protein sequence | MSSAISKKSA ATKMLIVAAA GALSLTALSA CSSSKSSSSS AASGTAGVSK TTQHVTLMVG GIDKQIYLPY KLADQLGFYK KYNVDVTLST EQDGGVGAEE AMVSGQVDMA GAWYNHAIDF QMKHKNVEDL VQLSGAPGER EMCGNKATVH TGADFAGKTM GVTDLGSGTD TLTQLIAAQS GVAKNKFSRT GVGAGSTALA ALKNGSISCV MTTQPTVTAI EKQNLGYSAI DLATTEGATK ALGGAWPAAG VLARTDWANQ HQEAVQDVVD ALVATMHWIS THSATDIANA LPASYTNNAI ISKADYIAGL TMDKSQFLPD GIMPAGGPKV VLTTEKLIGN ADDSVNLGAT FTNTYAIKAN QLEGFTTTTT PAGPTG
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