| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5584 |
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| Symbol | |
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| ID | 8336944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6435277 |
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| End bp | 6437433 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958688 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003116284 |
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| Protein GI | 256394720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.128967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.346665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACG ACGTCACGAG TCCTATCGAC CGCGAAGAAG CCGAGGCGGC ACTCCGCCTG
CTGGCGGGCG ACACCGCGCG GCTGCGCGAG GACCAGTGGA CCGCGATCGA GGCATTGGCC
GTGCACCGCC GCCGGGCGCT GGTGGTGCAA CGCACCGGCT GGGGCAAGTC GGCGGTCTAC
TTCGTCGCCA CAGCCCTGCT GCGCGCCCGC GGCGCCGGAC CGACCCTGAT CGTGTCCCCA
CTGCTGGCCC TGATGCGCAA CCAGATCGAG GCCGCCGAGC GCGCCGGCAT CCGAGCACGG
ACCATCAACT CGGCGAACCT GCACGAATGG CAAGAAATCC AGGCCGAGAT CGCCAACGGC
GTCGTCGACG TCCTCCTGAT CTCCCCGGAG CGCCTGAACA ACCCCGACTT CCGCGACGAG
GTGCTGCCCA AGCTCGCCTC CGAAGTCGGA CTGCTCGTCG TCGACGAAGC TCACACGGTC
AGCGACTGGG GTCATGACTT CCGCCCCGAC TACCGTCGGA TCCGGACCTT CCTGGCCGAT
CTGCCGCCTC GCGTGCCGGT GCTGGCGACG ACGGCGACGG CGAACGCGCG GGTGGTGGCG
GATGTGGCCG AGCAGCTCGG GACCGGTGAC GGGTCGGATG CGCTGGTGCT GCGCGGGACG
TTGGATCGCG AGAGCTTGTC GCTGCATGTG GTCCAGCTCG GCAGCCCGGA GGAGCGGTTC
GCTTTCCTGG CCGAGCAGCT GCCGAATCTG CCCGGGTCGG GGATCATCTA CACGCTGACG
GTCGCGGCCA CGGACGAGGT CGCCACGTTC CTGCGCTCTC GCGGCTTCGA GGTCGCGTCG
TACTCGGGAC GCACTGAGGA CGCCGAGCGG CGGCAGGCCG AGGCCGACCT GCTCGGCAAC
CGGATCAAGG CCCTGGTCGC GACCTCCGCG CTCGGGATGG GCTTCGACAA GCCGGACCTG
GGCTTCGTCG TGCACCTCGG GGCGCCGAAC TCGCCGATCG CGTACTACCA GCAGGTCGGG
CGCGCCGGGC GCGGTGTGGA CCACGCCGAG GTGCTGCTGC TGCCGGGGCG GGAGGACCGG
GCGATCTGGA AGTACTTCGC CTCGTTGGCG TTCCCGCCGG AGGATCAGGT GCGCCAGACG
CTGGACGCCC TGGCCGCCGC CGGCCGGCCG CTGTCCACCG CGGCCCTGGA GACCCAGGTC
GACCTGCGGC GCTCCCGGCT GGAGACGATG CTGAAGGTCC TGGACGTCGA CGGCGCGGTG
CGTCGCGTCA AGGGCGGCTG GGTCTCCACC GGCGAGCCGT GGCAGTACGA CGGCGAACGC
TACGCGCGGG TCGCCGCAGC TCGCGAGGCC GAGCAGCGCT CGATGATCGA GTACGAGACC
ACCGACGAGT GCCGCATGAC GTTCCTGCGC CGCCAGCTCG ACGACCCCGC CATCGAAGGA
CCCTGCGGCC GCTGCGACAA CTGTACCGGC GTGCACTGGA AGGCACACGT GAACGCGGGG
GTGGTCGACG CGGCGGGCAG CCACGCCAAA CGTGCCTGGG TGACGATCCA ACCGAGGCGC
CAGTGGCCCA CCGGGATGAG CGCTTTCGGG GTGGCGGTCA AGGGCAAGAT CCCAGCCGGG
GAGCTGGCGG CGGAGGGTCG CGCGCTGGCC CGGCTCACCG ATCTCGGTTG GGGCTCGGCC
CTGCGCGACC TGCTCGGGAG CGGCGTACCG GACCAGCCGG TACCGCCCCA ACTGCTCGAC
GCCATGGTCA ACGTCCTGAA ACACTGGGCC GGCGGCGACG GCTCCGGCCC GGCCTGGAGC
GAAACCGGGA GGCCGGCCAG CATCGTCACC ATCGCCTCGC GCAGGCGTCC CCGCCTGATC
GCCTCGCTGG CCGAAGGGGT CTCGCAGATC GGCCGGCTCC CGATCGCCGG CAGCGTGGAC
CGTGCGCGCG ACGACGGGCA CACCGGCCCG ACCAACAGCG CCTGGCGCCT GCGCTCGGTC
TACGACGCCT TCGACCTCGG CCCGCAGCTG CGTGAGCGCC TGGCCGAATG CCCTGGCCCC
GTCCTGCTCG TCGACGACCT CGTCGACTCC GGGTGGACGA TGACCGTCGC GGCCCGCTTG
CTGCGCCAGG CCGGCGCCCC CGCCGTGCTG CCGCTGGCCC TCGCCCTCGC CGGGTGA
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| Protein sequence | MRNDVTSPID REEAEAALRL LAGDTARLRE DQWTAIEALA VHRRRALVVQ RTGWGKSAVY
FVATALLRAR GAGPTLIVSP LLALMRNQIE AAERAGIRAR TINSANLHEW QEIQAEIANG
VVDVLLISPE RLNNPDFRDE VLPKLASEVG LLVVDEAHTV SDWGHDFRPD YRRIRTFLAD
LPPRVPVLAT TATANARVVA DVAEQLGTGD GSDALVLRGT LDRESLSLHV VQLGSPEERF
AFLAEQLPNL PGSGIIYTLT VAATDEVATF LRSRGFEVAS YSGRTEDAER RQAEADLLGN
RIKALVATSA LGMGFDKPDL GFVVHLGAPN SPIAYYQQVG RAGRGVDHAE VLLLPGREDR
AIWKYFASLA FPPEDQVRQT LDALAAAGRP LSTAALETQV DLRRSRLETM LKVLDVDGAV
RRVKGGWVST GEPWQYDGER YARVAAAREA EQRSMIEYET TDECRMTFLR RQLDDPAIEG
PCGRCDNCTG VHWKAHVNAG VVDAAGSHAK RAWVTIQPRR QWPTGMSAFG VAVKGKIPAG
ELAAEGRALA RLTDLGWGSA LRDLLGSGVP DQPVPPQLLD AMVNVLKHWA GGDGSGPAWS
ETGRPASIVT IASRRRPRLI ASLAEGVSQI GRLPIAGSVD RARDDGHTGP TNSAWRLRSV
YDAFDLGPQL RERLAECPGP VLLVDDLVDS GWTMTVAARL LRQAGAPAVL PLALALAG
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