Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5581 |
Symbol | |
ID | 8336941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6431081 |
End bp | 6431851 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644958685 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003116281 |
Protein GI | 256394717 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.148994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.161063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGG TCGAGCAGGG GAATCCCAAG GTCTCCGTCG TCATCCCGGC CTACAACGAG GGCGAGAACA TCGTCCCGGT GCTGGACCGG CTCTTCGAGG CCGTCTCGAT GCCGTGTGAA GTCCTGGTCG TCGTGGACAG CCCCGAGGAC TTGACCGTGC CGATCATCGA GCGCTACGCC GAGCACGAGC CGCGGCTGCG CTGTCTGATC AACACCTACG GCCGGGGCCC GGCCAACGCG ATCCGGTTCG GGATCGACAC CGCCAAGTCG CCGGCGGCGG TGGTGACGAT GGCTGACGGC TGCGACGACC CGCGGCAGAT CGATATCCTG GCCCGGTTGG TCGAGCGCGG CGTCGCGGTC GCGGCGGCCT CCCGGTACAT GCCCGGCGGG CAGCAGGTCG GCGGGCCGCT GTTCAAGGGC ACGCTGTCGA GCATGGCCGG TCGTTCCCTG GCGTTCTTCG CGCGAGTGGG AACGCGGGAC GCGACGAACT CCTTCAAGGC GTATTCCACC GATTTCGTGC GAGAGGTCGG GATCGACTCC CGCGACGGGT TCGAGATCGG GATCGAGCTG ACCGCCAAGG CCCGACGGCT GCGCCGGCCG GTCGCCGAGA TCCCGACGAT CTGGCTGGAC CGTACGCTGG GCGAATCGAA CTTCCAGCTC TCCAAATGGC TGCCCAAGTA CCTGAAGTGG TACCGGCTCG CCTTCGGACC TCCCCTGACC CTCGAGCAGT TGCAGCTGTT GAACAAGAAA GAAAGAGACG ACCTGACATG A
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Protein sequence | MSSVEQGNPK VSVVIPAYNE GENIVPVLDR LFEAVSMPCE VLVVVDSPED LTVPIIERYA EHEPRLRCLI NTYGRGPANA IRFGIDTAKS PAAVVTMADG CDDPRQIDIL ARLVERGVAV AAASRYMPGG QQVGGPLFKG TLSSMAGRSL AFFARVGTRD ATNSFKAYST DFVREVGIDS RDGFEIGIEL TAKARRLRRP VAEIPTIWLD RTLGESNFQL SKWLPKYLKW YRLAFGPPLT LEQLQLLNKK ERDDLT
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