Gene Caci_5581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5581 
Symbol 
ID8336941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6431081 
End bp6431851 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID644958685 
Productglycosyl transferase family 2 
Protein accessionYP_003116281 
Protein GI256394717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.148994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.161063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGG TCGAGCAGGG GAATCCCAAG GTCTCCGTCG TCATCCCGGC CTACAACGAG 
GGCGAGAACA TCGTCCCGGT GCTGGACCGG CTCTTCGAGG CCGTCTCGAT GCCGTGTGAA
GTCCTGGTCG TCGTGGACAG CCCCGAGGAC TTGACCGTGC CGATCATCGA GCGCTACGCC
GAGCACGAGC CGCGGCTGCG CTGTCTGATC AACACCTACG GCCGGGGCCC GGCCAACGCG
ATCCGGTTCG GGATCGACAC CGCCAAGTCG CCGGCGGCGG TGGTGACGAT GGCTGACGGC
TGCGACGACC CGCGGCAGAT CGATATCCTG GCCCGGTTGG TCGAGCGCGG CGTCGCGGTC
GCGGCGGCCT CCCGGTACAT GCCCGGCGGG CAGCAGGTCG GCGGGCCGCT GTTCAAGGGC
ACGCTGTCGA GCATGGCCGG TCGTTCCCTG GCGTTCTTCG CGCGAGTGGG AACGCGGGAC
GCGACGAACT CCTTCAAGGC GTATTCCACC GATTTCGTGC GAGAGGTCGG GATCGACTCC
CGCGACGGGT TCGAGATCGG GATCGAGCTG ACCGCCAAGG CCCGACGGCT GCGCCGGCCG
GTCGCCGAGA TCCCGACGAT CTGGCTGGAC CGTACGCTGG GCGAATCGAA CTTCCAGCTC
TCCAAATGGC TGCCCAAGTA CCTGAAGTGG TACCGGCTCG CCTTCGGACC TCCCCTGACC
CTCGAGCAGT TGCAGCTGTT GAACAAGAAA GAAAGAGACG ACCTGACATG A
 
Protein sequence
MSSVEQGNPK VSVVIPAYNE GENIVPVLDR LFEAVSMPCE VLVVVDSPED LTVPIIERYA 
EHEPRLRCLI NTYGRGPANA IRFGIDTAKS PAAVVTMADG CDDPRQIDIL ARLVERGVAV
AAASRYMPGG QQVGGPLFKG TLSSMAGRSL AFFARVGTRD ATNSFKAYST DFVREVGIDS
RDGFEIGIEL TAKARRLRRP VAEIPTIWLD RTLGESNFQL SKWLPKYLKW YRLAFGPPLT
LEQLQLLNKK ERDDLT