| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5580 |
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| Symbol | |
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| ID | 8336940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6430047 |
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| End bp | 6431084 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958684 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003116280 |
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| Protein GI | 256394716 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.507892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.185668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA AAAAGGTTCT GGTTTCCGGT TCGGCCGGGT TCATCGGCGG CTATGTGGTC
GAGGAACTGC TGGGCCGGGG CTACAAGGTC GTGGGGATCG ACAACTACTC CAAGTACGGT
CCAGTCACCA AGTCCTACGA CCAGCACCCG GATTACGAGT TCCACGAGGG CGACGTCCGC
GACACCGAGC TGATGGTCGA GCTCCTGTCG GACTGCGACC ACTTCATCGC CGGCGCCGCG
CTGATCGGCG GGATCTCCTA CTTCCACACC TACGCCTACG ACCTGCTCGC GACCAACGAG
CGGATCATGG CCTCCTCGTG CGACGCGGCG ATCAAGGCGC ACGCCGGCGG CACGGGCCGG
CTGAAGAAGG TCACGTACAT GTCGTCCTCG ATGGTGTTCG AGTCGGCGAC CGAGTGGCCG
TCCTTCGAGG GCCAGGAGCG GCAGGTGCCC CCGCCGTTGT CCTCCTACGG CTTCCAGAAG
CTCGCCGTGG AGTACTTCGC CAAGGCGGCC TGGGACCAGT ACAAGCTGCC CTACACGATC
GTGCGGCCGT TCAACTGCGT CGGCGTCGGC GAATCGCGCG CGCTGGGCGA CGAGGAGATC
CTGTCCGGGA ACGTGAAGCT GGCCATGAGC CACGTCGTGC CGGACCTGGT GCAGAAGATC
GTCAAGGGCC AGGACCCGCT GCACATCCTG GGCACCGGCG AGCAGATCCG GCACTACACC
TACGGCGGGG ACCTCGCGCG CGGGATCGTC ACCGCCATGG AGCACCCGGA CGCGGTCAAC
GACGACTTCA ACCTGTCCAC CCCGCACGGA CACTCGGTGG CCGAGCTGGC CCAGGCCATC
TGGGGCAAGA TCAAGGGCGC GGACGTGCCG ATGACTCTGA TCTCCGACGA CCCGTTCGAG
TACGACGTCC AGCGCAGGGT CCCGGCCACC GACAAGGCCG CCCGCGTCCT CGGCTTCTCC
GCCGACACCA CCCTGGACAC CATGCTCGAC GAGGTCATCC CCTGGATCGT CAGCGCCGTC
GAGAACGGAA CCATCTGA
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| Protein sequence | MTQKKVLVSG SAGFIGGYVV EELLGRGYKV VGIDNYSKYG PVTKSYDQHP DYEFHEGDVR
DTELMVELLS DCDHFIAGAA LIGGISYFHT YAYDLLATNE RIMASSCDAA IKAHAGGTGR
LKKVTYMSSS MVFESATEWP SFEGQERQVP PPLSSYGFQK LAVEYFAKAA WDQYKLPYTI
VRPFNCVGVG ESRALGDEEI LSGNVKLAMS HVVPDLVQKI VKGQDPLHIL GTGEQIRHYT
YGGDLARGIV TAMEHPDAVN DDFNLSTPHG HSVAELAQAI WGKIKGADVP MTLISDDPFE
YDVQRRVPAT DKAARVLGFS ADTTLDTMLD EVIPWIVSAV ENGTI
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