Gene Caci_5577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5577 
Symbol 
ID8336937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6426621 
End bp6427268 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID644958681 
Productvon Willebrand factor type A 
Protein accessionYP_003116277 
Protein GI256394713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.328861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC CGAACCTCCG CCACATAGTG ATGGTCCTGG ACCGGTCCGG CTCCATGCAG 
GCGGTCAAGA ACGACACCGA AGGCGGCCTC ACGGCGTTCC TGGAAGCTCA GAAGGAGATC
GCCGGCGATA CGCGGGTGTC GCTGTACCAC TTCTCCACCA CGTATGAGCC CGTATACGAG
AACCTGGCGC TCGCCGACGT GCCCGAGTAC ACGCTCGAGC CGCGCGGGAA CACCGCGCTG
CTGGACGCCA TCGGGCGGAC CATCACCGCC GTCAAGGCGC AGATCAAGGC GATGGACGTC
GAGGAGCGGC CCGGCGAGGT GGTCCTGGTC ATTCTCACCG ACGGTATGGA GAACTCCTCG
CGCGAGTACA CGTTGCCCGA GGTGAAGAAG CTGATCGAGA AGCGCCGCGC CAAGGGCTGG
CAGGTGGTGT TCCTCGGTGC CGATCAGGAC GCGATCACCG CGGCGGCCGG GATGGGCATC
GGCCGGGAGA CCAGCCTGTC CTATACGGCG CGCATGACGG GTCAGTCGAT GAGCACCGTG
GCGCGAATGA TGGCGCGCGG CTCGGCGTCA GGGAAGTACG AGTTCACCGA CGCCGAGCGC
AAGGCGGCTC GCGGGGAGTC GGAGGCCGAC CCGAAAGCCC AGCCGTAG
 
Protein sequence
MPNPNLRHIV MVLDRSGSMQ AVKNDTEGGL TAFLEAQKEI AGDTRVSLYH FSTTYEPVYE 
NLALADVPEY TLEPRGNTAL LDAIGRTITA VKAQIKAMDV EERPGEVVLV ILTDGMENSS
REYTLPEVKK LIEKRRAKGW QVVFLGADQD AITAAAGMGI GRETSLSYTA RMTGQSMSTV
ARMMARGSAS GKYEFTDAER KAARGESEAD PKAQP