Gene Caci_5574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5574 
SymbolargS 
ID8336934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6422317 
End bp6424176 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content72% 
IMG OID644958678 
Productarginyl-tRNA synthetase 
Protein accessionYP_003116274 
Protein GI256394710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.469409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.593378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG CACTGTCGGA GATCCTGGCG GACGACGTCC GCGCCGCGCT GACCGCGGTG 
CTGGGGGACG CGGCGCGCGG CGCCGACCCG CTGATCCGAC CCTCCGACCA CGCCGACTTC
CAGGCGAACG GGGTGCTGCC GCTGGCCAAG GCGGTGAAGG GGAACCCGAG GGAGCTGGCG
ATGCGGGTGG CCGCGGTGCT GGTGGGCTCG GCGGGCTCAG TGGGTTCCGA GGGCGCGCCG
GACTCGGCGG GCGCGGGCGT CTCCGCTGAG GGCGAGACCG AAGGCGGCGA GGGCACGGAG
CCGGTCGTCA CCTCCGGCGT GATCGCCGCC GTCGACGTCG CAGGTCCCGG ATTCCTCAAC
CTCACGCTCA CCGATGCCGC CCTGGCCGCG CAGGCCGCCG AGCGCCTCGG CGACCCGCGC
CTGGGCGTCG CGCCGACCGG CGTCGGCCGG ACCGCCGTCA TCGACTACTC CCAGCCGAAC
ATCGCCAAGG AGATGCACGT CGGCCACCTG CGCTCGACCG TCATCGGCGA CGCGCTGGTC
CGGCTGCTGG AGTTCGACGG CCGCACCGTG GTCCGCCAGA ACCACCTCGG CGACTGGGGC
ACGCAGTTCG GCATGCTCAT CCAGTACCTG GTCGAGCACC CCGAGGCCCG CCCCGCCGAC
GCCGAGCACT CCGGCGAGGT CGCGATCTCC TGGCTGACCG CCCTGTACCG CGACGCCCGC
GCGCACTTCG AGTCCGACGC CGAGTTCGCC GACCGCGCCC GCAAACGCGT GGTGACGCTG
CAGGGCGGCG ACGAGGAGTC GCTGGAAGCC TGGCGCGAGA TGGTCGCCGA GTCCAAGCGC
TACTTCGAGG ACGTCTACGG CCGCCTGGAC GTGCGCCTGG TCGACGCCGA CGCGGTGGGG
GAGAGCTTCT ACAACCCCTA CCTCGCCGAG GTCGCCGCCG ACCTGGAGGA GCGGGGCATC
GCGGTGTGGA GCGAGGGCGC GCTGTGCGTG TTCTTCGACG ACATCAAGGG TCCCGACGGC
GACCCGGTCC CGCTGATGGT GCGCAAGAGC GACGGCGGCT ACGGCTACGC CGCCACCGAC
CTGGCCGCCG TCCGCTACCG GGTCAACACC CTGAAGGCCG ACGAGATCCT CTACGTCGTC
GACAGCCGCC AGGCGCTGCA CTTCCGCATG GTCTTCGAGA CCGCGCGCCG CGCCGGCTAC
CTGCCCGAGG GCGTCGAGGC GGTGCACGTG CAGTTCGGCT CGGTCCTGGG CACCGACGGC
AAGCCCTTCA AGACCCGTGC GGGCAAGACC ATCCGCCTGA TCGAGCTGCT GGACAGCGCC
GTCGACCACG CGGTGGCCAC CGTCGAGGAG AAGAACCCGG ACCTGGCCGC CGCCGACGCC
CGCACCGAGG CCAAGCTCGT CGGCATCGGC GCGGTGAAGT ACGCCGACCT GTCGACCTCC
CGCACCAAGG ACTACATCTT CGACCTGGAC CGCATGGTCT CCCTCCACGG CAACACCAGC
GTCTACCTCC AGTACGCCCA CGCCCGCATC CACTCGATCC TGCGCAAGCT CCCCCCGGGC
ACCCCGGCGC GCATCCACAC CGACCTGGTC CTGGAGCCCG CCGAGCGCAA GCTCGCCCTG
CACCTCGACG ACTTCGGCGC GACCCTGGCG ACCGTCACGG AGAACTTCGA GCCGCACCGC
CTGGCGACGT ACCTGTACGC CCTGGCGCAG ACCTTCTCGG ACTTCTACGA GAACTGCCCG
GTCCTCAAGG CACCGACCGA CGCCGTCCGC GAAAACCGCG CCGCACTGGT CCAACTGACC
GGCGAGACCC TGAAGGCGGG CCTGGCACTG CTCGGCATCA GCGCCCCGGA CCAGCTGTGA
 
Protein sequence
MAKALSEILA DDVRAALTAV LGDAARGADP LIRPSDHADF QANGVLPLAK AVKGNPRELA 
MRVAAVLVGS AGSVGSEGAP DSAGAGVSAE GETEGGEGTE PVVTSGVIAA VDVAGPGFLN
LTLTDAALAA QAAERLGDPR LGVAPTGVGR TAVIDYSQPN IAKEMHVGHL RSTVIGDALV
RLLEFDGRTV VRQNHLGDWG TQFGMLIQYL VEHPEARPAD AEHSGEVAIS WLTALYRDAR
AHFESDAEFA DRARKRVVTL QGGDEESLEA WREMVAESKR YFEDVYGRLD VRLVDADAVG
ESFYNPYLAE VAADLEERGI AVWSEGALCV FFDDIKGPDG DPVPLMVRKS DGGYGYAATD
LAAVRYRVNT LKADEILYVV DSRQALHFRM VFETARRAGY LPEGVEAVHV QFGSVLGTDG
KPFKTRAGKT IRLIELLDSA VDHAVATVEE KNPDLAAADA RTEAKLVGIG AVKYADLSTS
RTKDYIFDLD RMVSLHGNTS VYLQYAHARI HSILRKLPPG TPARIHTDLV LEPAERKLAL
HLDDFGATLA TVTENFEPHR LATYLYALAQ TFSDFYENCP VLKAPTDAVR ENRAALVQLT
GETLKAGLAL LGISAPDQL