| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5568 |
|---|
| Symbol | |
|---|
| ID | 8336928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6417910 |
|---|
| End bp | 6418776 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644958672 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003116268 |
|---|
| Protein GI | 256394704 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0686596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA AGGTCAACGG TGTCGAGGTG TGCGTGGAGA CCTTCGGCGA CGAGGCGGAT
CCGCCGGTGT TGCTGGTCGG GGGCGTCACG ATGCTCAGCT GGCCCGACGG GTTGTGCGCC
GCGCTGGCCG AGCGTCAGCG GTATGTGGTG CGCTACGACC TGCGCGACGC CGGCCGCTCG
ACGTTCGCCG ACCCGGACCA GCCCGGCTAT GGCCTGCGCG ACCTGGTGAC CGACGCCTCC
GAGCTGGTGA CGGCGCTGGA CCTGGGACGT GCGCACGTGG CCGGGATCGG CGTCGGCGGC
TTCGTCGCGC AGCTCCTCGC GCTCGACCAC CCCGAGCAGG TCGCGTCGCT GACGCTGGTC
TCGACCCGGC CGGTCGCGCC CGGCCCGGTC GACGCCGACC TGCCCGACCA TTCGCACGAG
GTTCTGGGGC AGCTGTTCGG GCGTCCGGCG CCGGACTGGA CCGATCGGGA CAGCGTGGTG
GAGTACATGA CCGGCTCGGC GCGGCTGCTG GCCGGGTCGG CGGGGTTCGA TGAGAAGGAC
GCCCGCGCGA CCGCCGGAGC GATCTTCGAC CGGGCGGGAG ACACGGCGCA GGCGCAGGTC
GCGAGCCACC TCGGCACGGT GTTCGCGGCC CTCGACTGCA AGCCGCGATG GCGTGAGCGC
CTCGGCGAGA TCACCGCGCC GACGCTGGTG GTCCACGGGG ACGAGGACGC GTTCTTCCCG
CACGGGAACG GGGTCGCGCT GGCCGCCGAG ATCCCGGGCG CTTCGCTGCT CACCCTGCCG
GGCGTCGGCG TCGGGCAGGG TCTGCCGCGC GCGGCGTGGC CGGCTGTCGT CGAGGCCTTC
GACGCCTTGG TGGATCAGGC TTCCTGA
|
|---|
| Protein sequence | MQIKVNGVEV CVETFGDEAD PPVLLVGGVT MLSWPDGLCA ALAERQRYVV RYDLRDAGRS
TFADPDQPGY GLRDLVTDAS ELVTALDLGR AHVAGIGVGG FVAQLLALDH PEQVASLTLV
STRPVAPGPV DADLPDHSHE VLGQLFGRPA PDWTDRDSVV EYMTGSARLL AGSAGFDEKD
ARATAGAIFD RAGDTAQAQV ASHLGTVFAA LDCKPRWRER LGEITAPTLV VHGDEDAFFP
HGNGVALAAE IPGASLLTLP GVGVGQGLPR AAWPAVVEAF DALVDQAS
|
|---|
| |