| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5566 |
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| Symbol | |
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| ID | 8336926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6416652 |
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| End bp | 6417497 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958670 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003116266 |
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| Protein GI | 256394702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC ACGAGCTTGG GGCATTCCTC CGCAGCCGAC GCGAGCGGAT CCAGCCGCAG
GACGTCGGTC TGCCCGCGGG CCCGCGACGC CGGACGCCGG GTCTGCGCCG TGAGGAGGTC
GCGGTCCTGG CGCACATCTC GACCGAGTAC TACGTCCGGC TCGAGCAGGG CAGGGCGCCG
CGTCCCTCAA GCGAAGTGCT CGCCGGGATC GCCGGCGCGC TGCGGCTCAC CGATGCCGAG
TCCGATCACC TTCATCTGCT GGCCGGTACC GCGCCGAACC GTGCCGGGCT GCACCGGCGC
GACGTGCGGC CCAGCATCCT GCGGCTGCTT GAGCGGCTGC CGCAGACGGC TGCTTTCGTG
ACATCGGCGC TGTTCGAGGT GCTTGCCTGG AATCGCTTGG CGGCGGCGCT CATGGAGGAC
TACTCCAAGC TCGCCCCGCG AGACCGCAAT CTCGCGCGCC GCGCGTTCCT CGGGCCGGCG
GACCCCGACG CGCCGCTGTA TGGGATCTCC GACGCCGCGG AGTTCCGGAG CAACGTCGTC
ATGGAGCTTC GATCAGCTCT GGCGCGCTAC CCCGCCGATC CCTCGGTCGC CGGGCTCGTC
GACGAGCTGC GCGACGGCAG CGCCGAGTTC GTCCGGCTCT GGGAGCGGCA CGACGTGCAG
GCCACGACGA TGCTCACGAA GACGTTCCGG CATCCGGTCG TCGGAGACGT CACCGTCGAC
TGCGACTCGC TCGACCTCGC GGACCGCGAC CAGCACCTCG TGCTCTACAG CGCGCCGGCT
GGGTCGCCGG ACGCGGAGGC GCTGGCGTTC CTGGACGTGT TGGGAGCCGA GGGTCTCGTG
CGGTGA
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| Protein sequence | MDKHELGAFL RSRRERIQPQ DVGLPAGPRR RTPGLRREEV AVLAHISTEY YVRLEQGRAP
RPSSEVLAGI AGALRLTDAE SDHLHLLAGT APNRAGLHRR DVRPSILRLL ERLPQTAAFV
TSALFEVLAW NRLAAALMED YSKLAPRDRN LARRAFLGPA DPDAPLYGIS DAAEFRSNVV
MELRSALARY PADPSVAGLV DELRDGSAEF VRLWERHDVQ ATTMLTKTFR HPVVGDVTVD
CDSLDLADRD QHLVLYSAPA GSPDAEALAF LDVLGAEGLV R
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