| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5554 |
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| Symbol | |
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| ID | 8336914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6403510 |
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| End bp | 6405222 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958658 |
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| Product | hypothetical protein |
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| Protein accession | YP_003116254 |
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| Protein GI | 256394690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.352813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.911624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAA GCACGGAAGA GATACAGAGT CCTGTTATGG CTGGCGCAGC CGCAGCCGCA
GGCGGTACCG GCGAGCGACG CGTCGCGTGG CGGCCGATCG CGCTGGTGGC TGCCGCCGCC
GGAGCCGTGC ACCTGACGGT CGCGACGCGC TATGGCTGGC ACCACGACGA GTTCTACTAC
GTCATCTGCG GCCGGCATCC CGCGTTCGGC TACGTCGACC AGCCACCGGC GGCACCGCTG
CTGGCACGCT TCGCGGACGC GGCGGGCGGG CTGTTCGGCG TACGGCTGCT GGCGATCCTG
GCGCAGCTGG GCTGCATCGT GCTGACCGGC GTACTGGCGG CGCAGTTCGG CGGGCGGCGC
GCGGCGCAGA CGCTGGCGGC GGCTGCGGTG GCGGCGTCGC CGGTGTTCGT GGCGTCGTCG
ATGCTGTTTG GGACGACGGT GCTCGATCAG GTGGCGTGGG CGGGGCTGTT CGTGCTGGTC
ACCGGCGCAC TGCGGGAGAA CCGGCTGCTG TGGTGGACGG GCGCGGGCGC CGTGGCAGGA
CTCGGATTCG AGGGCAAGAA CACCATCGCG GTACTGGCGC TGGGCATCGC GGTGGGCGTG
GTCATGTACA GGCGGGATGT GCTGCGCACG CCGGGCCCGT GGGTCGCACT GGCGCTGGCG
GCGCTGCTGG CGGCACCGAA CGTGGTCTGG GACGCACTGC ACGGCTGGCC GAACCTGCGG
ATGGACCACG TGCTGTCGCA GCAGCAGGGC GGCCCGCTGG CGTCACTGGC AAAGTCCCCG
GAACTACCGC TGCTACTAGC CGGACCGCCG CTGATCGCCC TGTGGTGGAC CGGCCTACGC
TGGCTGCGCT CGCCAGAGGG CCGCACCCAC CGCTGGCTCC TGCCGGCCAC GGCGGTGGTG
ACGGCGGTCT TCATCGCCGG CGGCGGCAAG ACCTACTACC CGGCGCCCCT ACTGATCCCC
CTGTTCGCCG CCGGCGCAGC CGCTGCTCCG ATCGAGTGGT ATCCCCGGCG AGCCCTTCAT
TCGGCGGTTG ACGAAGCGGG ACAATCTACA CGAGGGTGGG TGTCCCCCGG ATTGGGGCGG
GGTGTACCAG AGACCGATAC CGCGCCAGGT CGCCCTGGAC CAGCCGCCGC CCGGCGTCGG
TGGCGGCAAC GGATCGCCCC CGGCGCGTCC CAGGGCGCGT CAGGGCTCCG CGCAATAGCT
TCAGCATCGT CTGTCAGGGC GGTCGCGATA TCAGCCCTGT TCGCCGCCAT CATCGGCCTC
CCCTTCCTCC CCCCGGCGGC CGCCACCGCG CTCCGGCCGG TGAACCCCGA GCTGATGCAG
ACCTACGGCT GGCCGCAGTT CACGCGCGAG GTCGCCGCAG CCGCCGCGAC ACAGCCGGCA
GGCGTGCCGA TCTTCGCGAG CGACTTCGGC GAGGCGGGCG CGCTGACCAT CCTCGGACCC
GCAGCCGGAC TGCGCCGACC GGTCTACAGC GGCCACGACA GCTACGTCTA CTGGCCCCCG
CCAGCCGGCA CACCGGACAC GGTGCTGTGC GTCGGCAAGT TTCAGCCCGC ATACCTGGAG
CGCTTCTGGG CGCAGGTCAC GGAAATCGCG CCGATCACGC TGCCGAGCGG ACTGAAGAAC
GCCGAGACGG AGCAGCACGC AGCGATCTAC CTGTGCCGCC AGCCACGCGG AACGTGGGAG
CAGATGTGGC CCGCGATGTG GCATGTGGAC TGA
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| Protein sequence | MDGSTEEIQS PVMAGAAAAA GGTGERRVAW RPIALVAAAA GAVHLTVATR YGWHHDEFYY
VICGRHPAFG YVDQPPAAPL LARFADAAGG LFGVRLLAIL AQLGCIVLTG VLAAQFGGRR
AAQTLAAAAV AASPVFVASS MLFGTTVLDQ VAWAGLFVLV TGALRENRLL WWTGAGAVAG
LGFEGKNTIA VLALGIAVGV VMYRRDVLRT PGPWVALALA ALLAAPNVVW DALHGWPNLR
MDHVLSQQQG GPLASLAKSP ELPLLLAGPP LIALWWTGLR WLRSPEGRTH RWLLPATAVV
TAVFIAGGGK TYYPAPLLIP LFAAGAAAAP IEWYPRRALH SAVDEAGQST RGWVSPGLGR
GVPETDTAPG RPGPAAARRR WRQRIAPGAS QGASGLRAIA SASSVRAVAI SALFAAIIGL
PFLPPAAATA LRPVNPELMQ TYGWPQFTRE VAAAAATQPA GVPIFASDFG EAGALTILGP
AAGLRRPVYS GHDSYVYWPP PAGTPDTVLC VGKFQPAYLE RFWAQVTEIA PITLPSGLKN
AETEQHAAIY LCRQPRGTWE QMWPAMWHVD
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