Gene Caci_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5548 
Symbol 
ID8336908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6397217 
End bp6397786 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID644958652 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003116248 
Protein GI256394684 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.664924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC TTGATCGTGT CGTGGAGCCC ACCGAGATCG TCGCGGGGCG CTACCAGCTG 
CGGCCGCCGT CGCTGCGGGA TGTCCCCGAC ATGATGGAGA TGTCGCGGGA CGCCGACATC
GCGTTGTGGA ACCCGCTGGC CTCCGGCGTC GACGAGGAGG CGGCGCGCGC CTGGGCCGAG
CGGTTCGCGG ACTGGGACGG CGGGCGCAGC GCGCTGTTCG GGGTCTACGA GGCGGTCGAG
GGACGGCTGC TGGGGTTGGT GTCGCTGCAC CGGATCGACC TGCACCTGTC GTTCGGCGAG
CTCGGCTACC GCGTCGCGCC GTGGGCTCGG GGGCGGGGCG TGGCGACTAT GGCGGTCGGG
ACCGTCGCGG AGTGGGCGTT CGGGTACCTG GAGCTGACGC GGCTGCAGCT GCTGCACGGC
GTGGAGAACG TCGCGTCGTG CCGCGTCGCG GAGAAGTGCG GCTTCCTGCA CGAGGGGACG
ACGCGGAGCT CCTACCGGTA CGGCGACGGC GAGCTGCACG ACGAGCACAT CCACGGCCGG
CTCATCGGGG ATCCGGCGCC GGCGCGCTGA
 
Protein sequence
METLDRVVEP TEIVAGRYQL RPPSLRDVPD MMEMSRDADI ALWNPLASGV DEEAARAWAE 
RFADWDGGRS ALFGVYEAVE GRLLGLVSLH RIDLHLSFGE LGYRVAPWAR GRGVATMAVG
TVAEWAFGYL ELTRLQLLHG VENVASCRVA EKCGFLHEGT TRSSYRYGDG ELHDEHIHGR
LIGDPAPAR