Gene Caci_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5543 
Symbol 
ID8336903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6394014 
End bp6395015 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID644958647 
ProductADP-ribosylation/Crystallin J1 
Protein accessionYP_003116243 
Protein GI256394679 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.883441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGA CCGGCTCGAT GTTCGGGCTC GCCTTCGGGG ACTGCATGGG CAAGCCCACG 
GAGTTCCAGC GCTTCGAGGA GATCGTGCAG CTCTACGGTC CGCAAGGGCC GACGCTCCTG
CCGCCGGGCG GCCTGGTCAC CGACGACACG CAGATGGCGC TGGCCGTCGC CGAAGCCCTC
CTGGAGCAGC CCGCCGGCGC GGATCTGGCG GTGGAGCCGT TCACCGCCTC CTTGATCGAG
CACTTCCTGG CGTGGGCGAA GTCGCCGGAC AACAACCGCG CGCCGGGCAT GACCTGCCTG
CGCGCCTGCG GCAATCTCTC CTCGGGACAG CCCTGGCCGC AGGCGACCCA GCGCGGCTCG
AAAGGCTGCG GCGCCAACAT GCGCGTGACG CCGATCGGCT TGGTCCCGGA CCTGCCGGAG
GCGACCGTCG CCGGCGCCGC CCAATTGCAA TCGGCGCTGA CCCACGGCCA CGCGACCGCC
CTGGCCGCCT CGGACCTGAC CGCCTTCGCG ACGCGCTGGC TGCTGGCAGG CATGGCGCCG
TCGGACCTGG TTCCGGCGCT GCGGGAACGC TGCCAGGAGC AGCGCCGCGT CTACCACGGC
GACTGGCTCG GCGACGATCT GTGGCGGGTC CCGATGCGGA ACTCCCCGGA GGAGTTCATC
GAGAACGGCT GGGTCGAGTG CGGGATGGTC CTCGGCGTCT TGGCCAAAGC CGCTGAGAAT
CCGGATCCGA CCATCGATCC CTGTGACTAC ACCGGCGAGG GATGGATCGC CGAGGAGGCG
CTGGCGACCG CGCTGCTGTG CTTCCTGATG TACCCGGACG AGCCGGTCCG CGCCCTCGGT
CGAGCCGCGG CGACCGGCGG CGACTCGGAC TCGATCGCCG CGCTGGCAGG GGCGTTCTTG
GGGGCGAGGC ACGGGCTGGA TGCGTTCCCG GCGCACTGGC CGGAGCACAT CGAGTACCGC
GAGCGGCTGG CGCGCGCCGG CGCCGCGTGG GACCGGACGT GA
 
Protein sequence
MTATGSMFGL AFGDCMGKPT EFQRFEEIVQ LYGPQGPTLL PPGGLVTDDT QMALAVAEAL 
LEQPAGADLA VEPFTASLIE HFLAWAKSPD NNRAPGMTCL RACGNLSSGQ PWPQATQRGS
KGCGANMRVT PIGLVPDLPE ATVAGAAQLQ SALTHGHATA LAASDLTAFA TRWLLAGMAP
SDLVPALRER CQEQRRVYHG DWLGDDLWRV PMRNSPEEFI ENGWVECGMV LGVLAKAAEN
PDPTIDPCDY TGEGWIAEEA LATALLCFLM YPDEPVRALG RAAATGGDSD SIAALAGAFL
GARHGLDAFP AHWPEHIEYR ERLARAGAAW DRT