Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5541 |
Symbol | |
ID | 8336901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6391408 |
End bp | 6393441 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644958645 |
Product | Peptidyl-dipeptidase Dcp |
Protein accession | YP_003116241 |
Protein GI | 256394677 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.481391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCATCG AGAATCCCTT TTTCCCGGCC AGCACCCTGC CCTACGAGCT GCCGCCGTTC GCCGCCATCC GGGAGGAGCA CTACACCCCG GCGTTCGACG CCGGGTTCGC CGAGCACCTG GCCGAGATCA AGGCGATCGC CGAGAACCCG GAGCCGGCGA CGTTCGAGAA CACGATCGTC GCCATGGAGC GCGCCGGCGC GCTCCTGCGC CGGGTCGCCG CGGTCTTCTT CGCGCAGACC TCCTCCGACA CCACCGACGG CATCCAGGAC ATCGAGCAGG ACGTCATCCC GCGCCTGGCC GCCCACTCGG ACGCGATCAC CCTGGACGCG GCGCTGTTCG CGCGCATCGA CGACCTCTAC GAGCGCCGCG CGGATCTCGG GCTGAGCGAG GTCGAGGTAC GCCTGTTGGA GAAGCACCAC CTGAACTTCG TGCTCGGCGG CGCGAAGCTC TCCGCCGCCG ACAAGGACCG CCTCAAGGAG CTCAACGAGC AGCTCGCCGC GCTGTCCACG GACTTCGACC GGAACCTGCT GGCCGCGAAC AAGGCCGGAC AGCAGGTCTT CGACTCCGCC GAGCAGCTGG CCGGGCTGTC GGCGGACGCG GTCGCGGCGG CGAAGGAGAA CGGCGAGGCG GTCGGGCTGC CCGGCAAGTA CGTCATCTCC CTGAAGAACT TCTCGAACCA GACGCAGCTG GCCTTCCTGG ACGACCGCGA GGCGCGGCAC GCACTGCTGA CCGCGTCGCT GGAGCGCGCT TGGGACACCA ACGGCCCGAT CGCCGTGCAG ATCGCGAAGC TGCGGGCCGA GCGCGCGGCG CTGCTGGGCT ACAGCTCCTA CGCCGAGTAC GCGGTGCAGG ACCGGACGGC CCAGAGCACC GAGGCGGTCG AGGACCTGAT GTCGCGGCTG ATCCCGGCTG CGGTGGCGAA CGCCGCCAAG GAGGCCAAGG CGTTGCGCGC GCATCTGCCG GCCGGGCAGA GCCTGGAGGC GTGGGACTGG ACGTACTACT CGGAAAAGGT GCGCCTGGCC GAGTACGACG TCGACTCCGA GGCGCTGCGG CCGTATCTGG AGCTGGACCG CGTGCTGATC AACGGCGTGT TCCACGCCGC GGAGCTGGTG TACGGGATCA CCTTCAAGGC TCGTCCGGAC CTGGTCGCCT ACCACCCGGA CGTGCGCATC TGGGAAGTGT TCAACACCGA CGGCTCCGGC ATCGGACTGT TCCTCGGCGA CTTCTACGCG CGCGGCTCCA AGCGCGGCGG CGCGTGGATG ACGAACTACG TGGACCAGTC CGGTCTGCTC GGCCAGGCGC CGGTCGTGGT GAACAACCTG AACCTCGCCA AGCCGCCGGC CGGCGAGCCC ACGCTGTTGA CGTGGGACGA GGTCCGCACA CTGTTCCACG AGTTCGGACA CGCCCTGCAC GGCCTGTTCT CCGACGTGGA GCACCCGACC TTCTCCGGCA CGAACACGCC GCGCGACTTC GTTGAGTACC CGTCCCAGGT GAACGAGATG TGGGCGGAAT GGCCGGAAGT ACTGGCGAAC TACGCTAAGC ATTACCGCAC TGGCGAGCCG GTCCCGGCGG AACTGCTGGA GCGCATGGCC GAGGCGGAGA AGTTCGGGCA GGGCTTCGCC ACCGTGGAGA TCCTCGGCGC GGTGATGCTG GACTGGGCTT GGCACAAGCT GGCAGCCGGC GAGGACCCGG GCGACGCCAA GGAGTTCGAG GCCGCCGCGC TGACGCACTA CGGACTGCTG GTTCCCGAGA TCCCGTCGCG GTACCGCACC AGCTACTTCG CGCACATCTG GGGCAACGAC TACAGCGCCG GGTACTACTC GTACCTGTGG AGCGAGGTCC TGGACAAGGA CACGGTCGAC TGGTTCAAGG ACGGCGCGGC GCAGGGCCGG ACGATCCGCG AGAGCGGCGA GGCGTTCCGG CGTGCGGTGC TCTCGCGCGG CGGGAGCGTG GATCTGATGG CGGCGTTCGC GCAGTTCCGG GGGCGCGCGC CGGAGGTCGG TCCGATGCTG CGGGCCCGAG GGCTCGAGGG CTGA
|
Protein sequence | MTIENPFFPA STLPYELPPF AAIREEHYTP AFDAGFAEHL AEIKAIAENP EPATFENTIV AMERAGALLR RVAAVFFAQT SSDTTDGIQD IEQDVIPRLA AHSDAITLDA ALFARIDDLY ERRADLGLSE VEVRLLEKHH LNFVLGGAKL SAADKDRLKE LNEQLAALST DFDRNLLAAN KAGQQVFDSA EQLAGLSADA VAAAKENGEA VGLPGKYVIS LKNFSNQTQL AFLDDREARH ALLTASLERA WDTNGPIAVQ IAKLRAERAA LLGYSSYAEY AVQDRTAQST EAVEDLMSRL IPAAVANAAK EAKALRAHLP AGQSLEAWDW TYYSEKVRLA EYDVDSEALR PYLELDRVLI NGVFHAAELV YGITFKARPD LVAYHPDVRI WEVFNTDGSG IGLFLGDFYA RGSKRGGAWM TNYVDQSGLL GQAPVVVNNL NLAKPPAGEP TLLTWDEVRT LFHEFGHALH GLFSDVEHPT FSGTNTPRDF VEYPSQVNEM WAEWPEVLAN YAKHYRTGEP VPAELLERMA EAEKFGQGFA TVEILGAVML DWAWHKLAAG EDPGDAKEFE AAALTHYGLL VPEIPSRYRT SYFAHIWGND YSAGYYSYLW SEVLDKDTVD WFKDGAAQGR TIRESGEAFR RAVLSRGGSV DLMAAFAQFR GRAPEVGPML RARGLEG
|
| |