| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5530 |
|---|
| Symbol | |
|---|
| ID | 8336890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6382718 |
|---|
| End bp | 6383659 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958634 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_003116230 |
|---|
| Protein GI | 256394666 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.842065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAAC GCGAATACGT ATACCCCCCG GTTATCCGGG CGATGATGGG TGCTTTCCGA
GCGCTCGACC TGAAGGTCGA CGTGCGCGGA GCCGACCGGA TCCCGCGCAG CGGCGGGGCG
GTGCTGGCCA GCAACCACAT CAGCTACCTG GACTTCATCT TCGCCGGGGC GGCCGCACTG
CCCTCGCGCC GCCGCGTGCG GTTCATGGCC AAGAAAGAAG TCTTCGACAA CCGGATCTCC
GGACCGTTGA TGCGCGGTAT GCGGCACATC CCGGTGGACC GGGAAGCCGG TTTGTCGTCT
TACCGCCAAG CGCTGGCCAA CCTGAAGTCC GGCGAAGTCG TCGGCGTCTT CGGCGAGGCG
ACGATCAGCC GGTCCTTCAT GATCAAGGAT CTGAAGAACG GCGCGGTGCG CATGGCACAG
GCCGCCGACG TCCCGCTGAT CCCGGTGGTG CTGTGGGGCA CGCAGCGCAT GTGGACCAAG
GGCCGCCCGA AGAACCTGCT CCAGCGGCAC GTGCCGATCA CCGTGCTCGT CGGCGAGCCG
ATGTACCCCA AGAAGGGTCA GAACTCGAAC GACCTGACCG CCGAGCTGCA CGCGCGCCTG
AGCGCCCTGC TCGACGAGGC GCAGTCGACC TACCCGGACA AGCCCTCGGG CCCGGCGGAC
TCCTGGTGGC TGCCGGCACA CCTCGGCGGC ACCGCGCCGA CGCTGGAAGA GGCGGCGGAG
ATGGACGCGC GCGACCGCGA GGAGAAGGAC GGCGCGAAGG ACAGCGCGAA GGACGGCGCG
AAGGACGGCG ACGCCAAGCC GGAGCAGGCT GCCGCGCCGG CGCCCGCCAC GGAGACCGTC
GCTGCCAAGG ACGCTGGCGC TGACGCCAAC GCCGACGCTC CCGAGGAAGC AGTCGTCGCC
GCGGAGACCA CCCCTGCCGA GGACACCGCC GACGACGCCT GA
|
|---|
| Protein sequence | MAEREYVYPP VIRAMMGAFR ALDLKVDVRG ADRIPRSGGA VLASNHISYL DFIFAGAAAL
PSRRRVRFMA KKEVFDNRIS GPLMRGMRHI PVDREAGLSS YRQALANLKS GEVVGVFGEA
TISRSFMIKD LKNGAVRMAQ AADVPLIPVV LWGTQRMWTK GRPKNLLQRH VPITVLVGEP
MYPKKGQNSN DLTAELHARL SALLDEAQST YPDKPSGPAD SWWLPAHLGG TAPTLEEAAE
MDARDREEKD GAKDSAKDGA KDGDAKPEQA AAPAPATETV AAKDAGADAN ADAPEEAVVA
AETTPAEDTA DDA
|
|---|
| |