| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5529 |
|---|
| Symbol | |
|---|
| ID | 8336889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6382054 |
|---|
| End bp | 6382617 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958633 |
|---|
| Product | protein of unknown function DUF402 |
|---|
| Protein accession | YP_003116229 |
|---|
| Protein GI | 256394665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACG AAAACTCCTT ACTGAAGCTA AACACTTCCA TCACCGTTCG GCTGGTGAAG
ACGCCGCGGC CGGATGTCGA GTATCCGGTC GTGGTCCGGC ACGACGACGG CGAGCACATC
GTGGTCGTCG GGCCCTGGGC TTCGGACACC GGCGCGCGCG ATATGGGCTT CACGGTGTTC
GAGCCCGGCG ACGTCTGGAC CGAGCACTAC TGGCGCTCGC GGTGGTACTC CATCAAGGAG
GTCCGTGACG CCTCCGGCGC GGTCAAGGGC TGGTATTGCG ACGTGACCCG GCCGCCGACG
GTGCGCGCCG GGGACGGCGG GGGCGGCAGC GACGGCGGGG GCGGCAGCGA CGGCGAAGGC
CCGAGCCTGG TCATCGGCGA CCTGGACCTG GATCTGTGGC TGTCCGGCGA CACCACGCAG
ATCCTGCGCC TGGACGAGGA CGAGTTCGCC GAGAGCGGGC TGACCGAGCG GGAGCCGGAG
ACCGCGGCGC AGGCCGTCGC CTCGCTGGAC GAGCTGGAGG CTATGGCTCG CTGCGGGGCG
TTCCCGATGC TGCTGGCTTG GTGA
|
|---|
| Protein sequence | MSNENSLLKL NTSITVRLVK TPRPDVEYPV VVRHDDGEHI VVVGPWASDT GARDMGFTVF
EPGDVWTEHY WRSRWYSIKE VRDASGAVKG WYCDVTRPPT VRAGDGGGGS DGGGGSDGEG
PSLVIGDLDL DLWLSGDTTQ ILRLDEDEFA ESGLTEREPE TAAQAVASLD ELEAMARCGA
FPMLLAW
|
|---|
| |