| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5524 |
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| Symbol | |
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| ID | 8336884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6377422 |
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| End bp | 6379095 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644958628 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003116224 |
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| Protein GI | 256394660 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.633916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC TCCCGTCAGC GCACGTCGAC AGCTTCGCCC GCGACCGCCT GCCCGCCGCG
GACCGGTGGC CCGAGCTGCG CTTCGACCTC GACGGACTGC ACTATCCCGA TCAGCTGAAC
TGCGCCGGCC ACCTGCTCGA CACCGCGATC GCCGCCTATG GGCCGGACCG CAAATGCCTG
ATCTCCAACG CCGAGACCTG GACCTACGGC GACCTGGACC GGCACAGCGA CCAGATCGCG
CACGTCCTGA CCGCCGAGCT CGGCGTCGTG CCCGGCAACC GGGTCCTGAT CTGCGGCCCG
AACAGTCCCT GGACCGTGGC GTGCTGGTTC GGCGTGCTCA AGGCCGGCGG CGTGGTGGTG
ACCGTCGTGC CGCTGCTGCG CAGCGAGGAG ATCGCGACCG TCGCCGAGAT CGCGCAGGTG
AGCGTGGCGC TGTGCGCGCC GGGGTGCGAC GAGCAGGCGT CGCTGGCCGG CGTGGCGGGC
ATGCGGGTCC TCACCGTCGG CGGCAAGGGA CCCGAGGACC TGGTCGAGCG CTGCTCCCGG
GTCGCGGCGG GGGAGTTCGA CACGGTGCGG ACGTCGCAGG ACGACGTCGC GATGATCGCC
TTCACCTCCG GGACCACCGG CCGCCCCAAG GGCTGCCTGC ACTTCCACCG CGACGTCCTG
GCGATCGCCG ACACCTTCGC CGAACATGTC CTGCGGGCCC GGCCCGACGA CGTCTTCACC
GGTAGCCCGC CGCTGGGCTT CACCTTCGGG CTCGGCGGCC TGGTCATCTT CCCGCTGCAC
GTCGGCGCCT CGACGGTGCT GCTCGAGCGG GGCAGCCCGG AGGCGCTGCT CGGTGCGATC
GAGAAGCACG GCGTCAGCGT GCTGTTCACG GCGCCGACCG CCTACCGCGC CATGCTCGCG
ATGCTGGAGT CGGACTCCCG GAGCGGGGAT GGCGACAGCA GCAGCGGCGG CAGCGGCGAG
GGAGGCGGCG ACACGCGTCT GAGCACGCTG CGACGCTGCG TCTCGGCGGG CGAGGCGCTG
CCGGGGGAGA CCTGGCGCGC CTGGCACGCC GCGACCGGCG TCAAGATCAT CGACGGCATC
GGCGCCACGG AGCTGCTGCA CATCTTCATC TCGGCTGCCG ACGACGACAT CCGCCCCGGC
TCCACCGGCC GTCCGGTGCC CGGCTGGGAG GCCGTGATCC TGGACGCCGA GGGGAACCCG
GTCCCGGACG GCGAACCGGG GCTGCTGGCG GTGCGCGGCC CGGTCGGCTG CCGCTACCTC
GCCGACGAGA GGCAGAGCAC GTATGTGCGC CACGGCTGGA ACTACACCGG CGACACCTAC
ATCCGCGACG CGGACGGCTA TTTCTGGTAC CAGGCGCGCT CCGATGACAT GATCATCTCC
TCCGGCTACA ACATCGCCGG TCCGGAGGTG GAGAACGCGC TGCTGCGGCA TCCCTCGGTG
CTGGAAGCTG GCGTCATCGG CATGCCGGAC GCGGATCGCG GGCAGCTGGT GACGGCGTTC
GTGGTGCTGC GGCCGGAGGC GGCGACCGGG GAGGCGACTG TCAAGGAGCT GCAGGAGTTC
GTGAAGGCAC GCATCGCGCC GTACAAGTAC CCGCGCGCCG TGCACTTCGT CCCCGCGCTG
CCGCGCACCA ACACCGGCAA GCTCCAGCGG TTCAAGCTCC GAGATCTGCT CTGA
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| Protein sequence | MDLLPSAHVD SFARDRLPAA DRWPELRFDL DGLHYPDQLN CAGHLLDTAI AAYGPDRKCL
ISNAETWTYG DLDRHSDQIA HVLTAELGVV PGNRVLICGP NSPWTVACWF GVLKAGGVVV
TVVPLLRSEE IATVAEIAQV SVALCAPGCD EQASLAGVAG MRVLTVGGKG PEDLVERCSR
VAAGEFDTVR TSQDDVAMIA FTSGTTGRPK GCLHFHRDVL AIADTFAEHV LRARPDDVFT
GSPPLGFTFG LGGLVIFPLH VGASTVLLER GSPEALLGAI EKHGVSVLFT APTAYRAMLA
MLESDSRSGD GDSSSGGSGE GGGDTRLSTL RRCVSAGEAL PGETWRAWHA ATGVKIIDGI
GATELLHIFI SAADDDIRPG STGRPVPGWE AVILDAEGNP VPDGEPGLLA VRGPVGCRYL
ADERQSTYVR HGWNYTGDTY IRDADGYFWY QARSDDMIIS SGYNIAGPEV ENALLRHPSV
LEAGVIGMPD ADRGQLVTAF VVLRPEAATG EATVKELQEF VKARIAPYKY PRAVHFVPAL
PRTNTGKLQR FKLRDLL
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