| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5520 |
|---|
| Symbol | |
|---|
| ID | 8336880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 6372830 |
|---|
| End bp | 6373657 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644958624 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_003116220 |
|---|
| Protein GI | 256394656 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.181326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGT TCCGGGGTTC AGTCCCGTTC ACCACTACGT GGGAGCACTT CCGCGTGGAG
CACGCCGACG GGATCGCGAC CGTCACCCTC GACCGCCCCG ACAAGATCAA CGCCTTGACC
TTCGAGGCCT ACGCCGACCT GCGCGACCTG CTCGCCGAGC TGCCGCACCG CGGCGACACC
CGGGTCCTGG TGCTGCGCGG GGAGGGTCCG GGCTTCTGCT CCGGCGGCGA CGTCAACGAG
ATCATCGGCG AGCTGCTGGC GATGCGCCCC GACGAGCACC TGGCCTTCAC GCGCATGACC
GGCGACGTGG TGCGCGCGCT GCGGGAGATC CCGATCCCGG TGATCGCCTC GATCCACGGC
ATCGCCGCCG GCGCGGGCTC GGTGCTGGCC CTGGCCGCCG ACTTCCGGAT CGTGGCGCGC
TCGGCGCGCT TCGCGTTCCT GTTCACCAAG GTCGGGCTGT CCGGCTCCGA CATGGGAGCG
GCCTACCTGC TGCCGCGGAT CGCCGGGCTG GGCAACGCCA CCAAGCTGCT GATGCTCGGC
GACACCGTCA AGGCGCCGGA GGCCGACAAG TACGGCCTGG TCAGCGAGCT GGTCGAGGAC
GAGGACCTGG AGGCGGCGAC CACCGCGCTG GCCCGGCGGC TGGCCGACGG TCCGGCGCTG
GCCTACGCGC AGACCAAGAT GCTGCTGACC CGCGAGCTGG ACATGGGCCT GTCGCCGTCG
CTGGAGATGG ACGCCGCGGT CCAGGCGCTG CTGATGAACA CCCGCGACCA CGCCGAGTTC
CACCGCGCGT TCAACGCCAA GGAGACGCCG AAGTGGGAGG GCCGATGA
|
|---|
| Protein sequence | MSPFRGSVPF TTTWEHFRVE HADGIATVTL DRPDKINALT FEAYADLRDL LAELPHRGDT
RVLVLRGEGP GFCSGGDVNE IIGELLAMRP DEHLAFTRMT GDVVRALREI PIPVIASIHG
IAAGAGSVLA LAADFRIVAR SARFAFLFTK VGLSGSDMGA AYLLPRIAGL GNATKLLMLG
DTVKAPEADK YGLVSELVED EDLEAATTAL ARRLADGPAL AYAQTKMLLT RELDMGLSPS
LEMDAAVQAL LMNTRDHAEF HRAFNAKETP KWEGR
|
|---|
| |