| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5515 |
|---|
| Symbol | |
|---|
| ID | 8336875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6367738 |
|---|
| End bp | 6369273 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644958619 |
|---|
| Product | Methyltransferase type 12 |
|---|
| Protein accession | YP_003116215 |
|---|
| Protein GI | 256394651 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.172303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTGA CGATTACCGC GACGCCGCCG CCCGGCGCCG AGTGGCCGGC CACCGACCTG
GGCTTCCTGC TCCACAAGAA CCCCGACCGG GTCCAGGCCT TCGACGTGAC CTACGGCAAG
GCCCATGTGT TCTATCCAGC CGCCGGTCCT CAGGAGTGCA CCGCCGCGTT GCTGCTCGAG
GTGGATCCGA TCGCCCTGGT GCGCGGCCGC GGCCGCAACG CCCCGGACTT CGCGCTCTCG
CAGTACGTCA ACGACCGGCC CTACGCGGCG TCCTCGCTGC TGGCCTCCGC CCTCGGGAAC
GTCTTCCGCA CCGCCCTGCG CGGCCGCTGC GACCAGCGCC CGGACCTGGC CGCCACCGCC
CTGCCGCTGC GCGTCGAGGT CCCGGCGCTC ATCTGCCGCG AACCGCAGCT GGCGGTCGAG
CTCTTCGAGC CGCTGGGCTG GACGGTCGCG GCCGAGCCGG TCGCCCTGGA CCCGGCGTTC
CCCGAATGGG GCGCCTCGCG CTACACGAGC CTGACCCTCA CCGGCACCCT GCGCCTGTCC
GAGGCGCTGT CGCACCTGTT CGTCCTGCTG GCCGCCCTCG ACGGCGCCAA GCACTACTGG
GTCGCCAGCG ACGAGGTCGA CAAGCTGGTC CGCGCCGGCG AGGGCTGGCT CGGCGCCCAC
CCGCTGCGCG GCATGATCGC CCGCCGCTAC CTGGCCCGGC GCCAGCCGCT GGTCCGCGAG
GCGCTGGCAC GGCTGGCGGA GGTGGACGAC GTCGAGCCGG AGGTACTGGA CAACGCGGTG
GGGTTCGACG GCGAGCCGGT GCAGGAATCC GCTCCGGACG CCGTCCCGGC GAAAGAACGC
AAGCTGTCGC TGGCCACCGC CCGCCGCGAA GCCGTCGTCG AGACCCTGCA CGAGGCCGAA
GCCTCGCGGG TCCTGGACCT CGGCTGCGGC GAGGGCGCAC TGCTGCGCGA CCTGCTGAAG
GACAAGGCGT TCACCGAGGT CGTCGGCATC GACGTCTCGG CGCGCGCCCT CCAGATCGCC
GCCCGCAAGC TCCACGTCGA TCGGCTGCCC GACCGCGTCA AGGCCCGCCT GACCCTGCGC
CAGGGCGCGC TGACCTACAC CGACGCGCGG CTCGCCGGCT ACGACGCCGC GGTCCTGATG
GAGGTCATCG AGCACGTCGA CGCCCACCGC CTCCCCGCGC TCGAGCACGC CGTCTTCCGC
GCCGCGCACC CCCGCGCGGT CGTGGTGACC ACGCCGAACG TCGAATACAA CGCGCGCTAC
GAGACCCTGG AGGCCGGCCG CTTCCGGCAC AGCGACCACC GGTTCGAGTG GACGCGTGCG
GAGTTCCGCG CCTGGGCCGA ACGGGTCGCC GCGGCGCACG GTTACGACGT CCGCTTCAAG
CCCGTCGGCG AGGTCGACCC GGAGCTCGGG CCGTCCACGC AGCTCGCGCT GTTCACTCTC
GCCAAGAGCC CGACCAACGA AAACCTGACC AACGAGAACC TGACCAACGA GAACCTGACC
AACGACAACC CGAAGGAGGC CTCGGCAGAT GTCTGA
|
|---|
| Protein sequence | MLLTITATPP PGAEWPATDL GFLLHKNPDR VQAFDVTYGK AHVFYPAAGP QECTAALLLE
VDPIALVRGR GRNAPDFALS QYVNDRPYAA SSLLASALGN VFRTALRGRC DQRPDLAATA
LPLRVEVPAL ICREPQLAVE LFEPLGWTVA AEPVALDPAF PEWGASRYTS LTLTGTLRLS
EALSHLFVLL AALDGAKHYW VASDEVDKLV RAGEGWLGAH PLRGMIARRY LARRQPLVRE
ALARLAEVDD VEPEVLDNAV GFDGEPVQES APDAVPAKER KLSLATARRE AVVETLHEAE
ASRVLDLGCG EGALLRDLLK DKAFTEVVGI DVSARALQIA ARKLHVDRLP DRVKARLTLR
QGALTYTDAR LAGYDAAVLM EVIEHVDAHR LPALEHAVFR AAHPRAVVVT TPNVEYNARY
ETLEAGRFRH SDHRFEWTRA EFRAWAERVA AAHGYDVRFK PVGEVDPELG PSTQLALFTL
AKSPTNENLT NENLTNENLT NDNPKEASAD V
|
|---|
| |