Gene Caci_5493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5493 
Symbol 
ID8336853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6333848 
End bp6334336 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID644958597 
Producthypothetical protein 
Protein accessionYP_003116193 
Protein GI256394629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0185051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.224471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTGA TCATGGCTAT TAAGAATCCG CTGATGGGGG CTGCCGAGAT CGGCAAGCTG 
TTCGACGTCA GTCGTCAACG AGTCCAGCAA CTGATCGCCA AGGCCGATTT CCCCGTCCCC
GAAGCGGACC TGGCCATGGG CAAGGTCTGG AGCACCAGGA ACGTCAAGGA CTGGGGTTTG
CAGGCCGGCC GGCCCTTCCT CGTTGCCTAC GCGTTCCGTG ACCGGGACGG GCAATGGCAC
GGGCCTGAGC ACCGGCTCGA GACCGGCTAC GTCGAGGGCG TGCTGGCCAT CTCCGACGAC
GCCAACGCCA AAGCGTTCGC CGGACAGACC ATCACGCTGC GATGCGGGTT CCTCGCCGGG
CAACCCAACC CCGTCGCTGG CGATATCTCT GCCAACTTCG CAATCGTCAC CGGCCCCAAC
GATCAGCGCT ACGGCGTTCT ACTCACCCAC GAAGTTGCAG ATCTCCTCGC TGGCACCTAC
ACCGAGTAA
 
Protein sequence
MIVIMAIKNP LMGAAEIGKL FDVSRQRVQQ LIAKADFPVP EADLAMGKVW STRNVKDWGL 
QAGRPFLVAY AFRDRDGQWH GPEHRLETGY VEGVLAISDD ANAKAFAGQT ITLRCGFLAG
QPNPVAGDIS ANFAIVTGPN DQRYGVLLTH EVADLLAGTY TE