Gene Caci_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5487 
Symbol 
ID8336847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6326498 
End bp6328513 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content74% 
IMG OID644958591 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003116187 
Protein GI256394623 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.153721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGAG CCTCGGCCCT GGCGGTCGCC GCCTTGCTCC CGGTGCTGGT CGCGGCGCCG 
GCGGCGCGGG CCGACGAGGT GCGGTCGGCG CAGTGGCCGA TCACGTTCCT GAACCTGCCG
CAGGCCTGGA AGACCACCAA GGGCGCCGGC GTCACGGTCG CGGTGCTCGA CACCGGCGTC
GTGGGCTCGC GCGCGGACCT GACCGGGCAG GTCACGACCG GTCCGGACCT GGTCGGCGGG
AGTGGGAAGC CGGGGGATCC GGACTGGGGC GTGCACGGGA CCGGGATGGC TTCGGTGATC
GCCGGGCACG GGCACGGTCC CGGCGGCAGC CAGGGCGTGA TGGGCGTCGC GCCGGCGGCG
AAGATCCTGT CGGTGCGGGT GATCCGGGAC GACGAGAGCC CGGACACCGG GCTGCAGCAG
GCCTCGCACA CCCCGATCTC GCAGGGCATC CGCTACGCCG TCGACCACGG CGCGCAGGTC
ATAAGCATGT CCCTCGGCGG CACGGTGTCC GGCGCGGACA GCGACAGCAC GAACGAGGCC
GACGCGGTGC GCTACGCCAT CGCGCACGGC GTGTCGGTGG TGGTGTCGGC GGGCAACTCC
GGCGACAAGC CGTCGAAGGA CGTCACGGAG TACCCGGCCG GCGAGCGCGG GGTCATCGGC
GTGGCGGCGG TGGACCAGAA CGGCAAGCGC GCCTTCTTCT CCTCGACCGG ATGGGACGTG
GCGGTCGCCG CACCCGGCGT CGCCATTCCG ATGGCGCTGC CGGTCAACGA CCTGGCGGGG
GACACCTACG CCGACTTCGG TCCCGAGATC GGCGACGACA TCCTGGTCGG CGCGGGGACG
AGCCCGGCGT GCGCCTACGT CGCCGGGGTC GTGGCGCTGA TCCGCTCGGA GAATCCGGCG
CTGAGCCCGG AGCAGGTGGC GCAGATCGTG AAGGACACCG CGTCGCACCG CCCGGCGCAG
GGACGGAACG ACCAGCTCGG GAATGGGATC GTGGACCCGG TGGCGGCGCT GAAGGCGGCG
GCGGGGGTGG CCGGGACGCC GCCCGCGCCG AAGGCGTCGC CGTATCAGGG GGCGAAGTAC
TTCGGCTTCG GGCCGGAGGT GGTGGCCGAG CAGCGGATCG GCGGGCTGAA CGAGCGCCGG
CGCGGGATGG TCGACGCCGC GGTGGCGGTG ACCGGGTCGC TGGTACTCGG CGGGTGGTTC
GTGGCGCGGG GACGTCGGCG CGCGCGGGCC GCGGCGTTGC TGGCGCCGGT CGTGATACCG
GTGCCCCTGC CGATGCCGAT CGGGTTCATG CCGCTCGGGC CGATGCCGAT CGGTCCGATG
CCGGTGCCCG GGCCCATGCC GCCGGTGTCG GTGACGGTGC CGAATCCGTT TTTGGCCGGG
GTCCCGGCCG AGATCCCGGC ACCCGTGCCC GAGCAGCCGC GCGTCTGGGC TCCCACTAAA
GTCGAGCCCA TGACCGACTT CGCAGGACGC ACGCTGGCTC CCTCCGCCTT CACCAACGAC
GACGGAGGCG CCGACCCTGC GCTGCTGGCC GTCCTGGAGG CGCACGGCCG GAGCGAAGCG
GCGGTCGAGC ACGCGTACGG GTACCTGCTC AACGCGCGCG TCCTGGCGCC GATCGTCGCG
GTGCTCGGCG AGGCCGAGGA AGTGACCGAC GACCAGGGCC GCACCCTGCG CCGCGACAAG
AACAGCGACA TGGCGCTGGT GACGCTGGTC GCGCCGGACG GCACGCGCGC GCTGCCGGTG
TTCACCTCGG TGCGCGCGCT CGTCGAGTGG AACCCGGAGG CGCGGCCGAT GCCGGTGGCG
TTCCCGCGGG CCTGTGCGGC GGCGCTGGCC GAGGGGGCGG AGATCGTGTT GGTGGACCTG
GCGCGGCCGT CGTTCCTGGA GGTCGAGCCG GCTGCCGTGC GCGCCTTCGC CGCGCTGCTG
GAGAAGACCG AGGCCGAGGC GAGGACCGAG ACCGAGACCG AGACCGAGAC CGGCGACAAT
GCCGGCGAGG CCGCCGACGA GGCGACCGCG AGCTGA
 
Protein sequence
MRRASALAVA ALLPVLVAAP AARADEVRSA QWPITFLNLP QAWKTTKGAG VTVAVLDTGV 
VGSRADLTGQ VTTGPDLVGG SGKPGDPDWG VHGTGMASVI AGHGHGPGGS QGVMGVAPAA
KILSVRVIRD DESPDTGLQQ ASHTPISQGI RYAVDHGAQV ISMSLGGTVS GADSDSTNEA
DAVRYAIAHG VSVVVSAGNS GDKPSKDVTE YPAGERGVIG VAAVDQNGKR AFFSSTGWDV
AVAAPGVAIP MALPVNDLAG DTYADFGPEI GDDILVGAGT SPACAYVAGV VALIRSENPA
LSPEQVAQIV KDTASHRPAQ GRNDQLGNGI VDPVAALKAA AGVAGTPPAP KASPYQGAKY
FGFGPEVVAE QRIGGLNERR RGMVDAAVAV TGSLVLGGWF VARGRRRARA AALLAPVVIP
VPLPMPIGFM PLGPMPIGPM PVPGPMPPVS VTVPNPFLAG VPAEIPAPVP EQPRVWAPTK
VEPMTDFAGR TLAPSAFTND DGGADPALLA VLEAHGRSEA AVEHAYGYLL NARVLAPIVA
VLGEAEEVTD DQGRTLRRDK NSDMALVTLV APDGTRALPV FTSVRALVEW NPEARPMPVA
FPRACAAALA EGAEIVLVDL ARPSFLEVEP AAVRAFAALL EKTEAEARTE TETETETGDN
AGEAADEATA S