Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5483 |
Symbol | |
ID | 8336841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6323005 |
End bp | 6323757 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644958585 |
Product | translation initiation factor IF-3 |
Protein accession | YP_003116183 |
Protein GI | 256394619 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.195942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCAGCACTG AGCCCCGTAT CAACGACCGG ATCCGCGTTC CCGAAGTGCG GCTGGTCGGC CCCAACGGTG AGCAGGTCGG CATCGTGTCG ATCCAGGACG CGCTCCGGCT GGCTCAGGAG CAGGATCTCG ACCTGGTCGA GGTCGCGGCG ACCGCACGGC CGCCGGTCGT CAAGGTCATG GACTACGGCA AGTACAAGTA CGAGTCCGCC CTGAAGGCCC GTGAGGCGCG CAAGAACCAG GCGCACACGG TCATCAAGGA GATGAAGCTC CGCCCGAAGA TCGACCCGCA CGACTACGAG ACCAAGAAGG GTCACGTGGT GCGGTTCCTG AAGGCCGGGG ACAAGGTCAA GATCACCATC ATGTTCCGCG GCCGCGAGCA GTCCCGGCCC GAACTCGGCC GGCGCCTGCT GAGCAAGCTC GCCGAGGACG TGGCCGAGCT CGGCTTCGTG GAGTTCGCGC CGAAGCAGGA CGGCCGCAAC ATGATCATGG TCCTCGGCCC GCACAAGAAG AAGACCGAGG CCATGGCCGA GGCGCGGCTG GCCAAGGAGC AGCGCAAGGC CGGCGGTGTG GTCGGGGAGA CCGAAACCGC CGACGCCGAG GCCCTGGACA CCGAGGTGCT CGACACCGAG GCCCTGGACA CCGAGGCCGA GACGACCGAG ACCGCCGAGT CGGCGGAGTC GGCCGAGCAG ACCGAAGGCC TTGTCGGTGC CGCCGCGGCG GCCGCCGACC AGACCGGCGA AGAGCAGTCC TGA
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Protein sequence | MSTEPRINDR IRVPEVRLVG PNGEQVGIVS IQDALRLAQE QDLDLVEVAA TARPPVVKVM DYGKYKYESA LKAREARKNQ AHTVIKEMKL RPKIDPHDYE TKKGHVVRFL KAGDKVKITI MFRGREQSRP ELGRRLLSKL AEDVAELGFV EFAPKQDGRN MIMVLGPHKK KTEAMAEARL AKEQRKAGGV VGETETADAE ALDTEVLDTE ALDTEAETTE TAESAESAEQ TEGLVGAAAA AADQTGEEQS
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