Gene Caci_5478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5478 
SymbolpheS 
ID8336836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6318754 
End bp6319896 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID644958580 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_003116178 
Protein GI256394614 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.504103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAC CGAACAAGTC GTACGACCCG GTGGAAGTCG AGGCGGTGAA GCCCGACGAG 
GTCGCCCGCC ACCGGGCCGA CGCGCTGGCC GCGATCGCCG CCGCGGCGTC GCTGGACGCC
CTGCACCAGG TGAAGATCGC CGTGGCCGGC GACCGCGCGC CGCTGGCGCT GGCCAACCGG
GAGATCGGCG CGCTGCCGCC GGCCGCCCGG GCCGAAGTCG GCAAGCGCAT CGGCGAGGCC
CGCGGCGCGG TGAAGGCCGC GCTGGCCGCG CGCCAGGAGG CGCTGGAGAC CGAGCGCGAC
GCGCGGGTCC TGGTCGAGGA GGCCGTGGAC GTCACGCTGC CCTGGGACCG CGCCCCGCGC
GGCGCCCGGC ACCCGCTGAC CACGATCCAG GAGCGGATCG CGGACATCTT CGTGGCCATG
GGCTACCAGG TGGTGGACGG TCCCGAGGTC GAGGCCGAGT GGTACAACTT CGACGCGCTC
AACTTCCCGC CGGACCACCC GGTGCGGGAC TTGCAGGACA CGTTCTTCGT CGCCGGCAAG
GGCCAGGACC AGGACCAGGA CACAGAGGGC GCGGTCAGCG GGCTGGTCCT GCGCACCCAC
ACCTCGCCGG TCCAGGCGCG CACGCTTCTG GCGCAGGGCG CGCCGGTCTA CGCCGTCTCG
CCGGGCCGCA CCTACCGCAC CGACGAGCTG GACGCCACGC ACACCCCCGT GTTCAGCCAG
ATCGAGGGTC TGGCTGTTGA CGAGGGCCTG ACGATGGGCG ACCTGAAGGG CACGCTGGAC
CACTGGGCCA CGGCGATGTT CGGCGACGGT GTGGTGACCC GGCTGCGTCC GCACTTCTTC
CCGTTCACCG AGCCCTCGGC CGAGGTCGAC CTGCAGTGCT TCGTCTGCAA GGGCGCCTCG
GTGGGCGACC CGGAGAACCC GTGCCGCACC TGCGGCTCGG AGGGCTGGAT CGAGTGGGGC
GGCTGCGGGA TGGTCAACCC GCGCGTGCTG ATCGCGTGCG GCGTGGACCC CGAGCGCTAC
AGCGGGTTCG CCTTCGGGAT GGGTCTTGAG CGGAGCCTGA TGTTCCTGAA CAACGTCCAG
GACATGCGGG ACATGATCGA GGGAGACGTG CGCTTCACGC TCCCGTTCGG GATGGAGATC
TGA
 
Protein sequence
MSAPNKSYDP VEVEAVKPDE VARHRADALA AIAAAASLDA LHQVKIAVAG DRAPLALANR 
EIGALPPAAR AEVGKRIGEA RGAVKAALAA RQEALETERD ARVLVEEAVD VTLPWDRAPR
GARHPLTTIQ ERIADIFVAM GYQVVDGPEV EAEWYNFDAL NFPPDHPVRD LQDTFFVAGK
GQDQDQDTEG AVSGLVLRTH TSPVQARTLL AQGAPVYAVS PGRTYRTDEL DATHTPVFSQ
IEGLAVDEGL TMGDLKGTLD HWATAMFGDG VVTRLRPHFF PFTEPSAEVD LQCFVCKGAS
VGDPENPCRT CGSEGWIEWG GCGMVNPRVL IACGVDPERY SGFAFGMGLE RSLMFLNNVQ
DMRDMIEGDV RFTLPFGMEI